RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CTC1Q2NKJ3 1217 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CES3Q6UWW8 571 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 HAUS6Q7Z4H7 955 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZFAND2BQ8WV99 257 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 THAP2Q9H0W7 228 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 C12orf65Q9H3J6 166 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PCDHGA10Q9Y5H3 936 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 COPG1Q9Y678 874 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TAF6LQ9Y6J9 622 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RIPK2O43353 540 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 JAK1P23458 1154 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SNRNP48Q6IEG0 339 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 KLHDC10Q6PID8 442 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 KCTD17Q8N5Z5 321 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SORCS3Q9UPU3 1222 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SPTLC1O15269 473 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 HOXD12P35452 270 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 IL5RAQ01344 420 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RHAGQ02094 409 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 RBBP7Q16576 425 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 OR8H3Q8N146 312 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CRISPLD1Q9H336 500 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SLC5A4Q9NY91 659 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 USE1Q9NZ43 259 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 A0A1W2PQJ5 194 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF806P0C7X5 589 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TTKP33981 857 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 C6orf89Q6UWU4 347 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PTPRHQ9HD43 1115 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 NGRNQ9NPE2 291 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SLC24A2Q9UI40 661 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MAD2L2Q9UI95 211 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 GCP02774 474 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MTMR2Q13614 643 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 PDK1Q15118 436 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CHSY1Q86X52 802 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 LRRC4Q9HBW1 653 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 GPAMQ9HCL2 828 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 VPS45Q9NRW7 570 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 OLA1Q9NTK5 396 aaKnown RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 CD274Q9NZQ7 290 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MID2Q9UJV3 735 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 OXSR1O95747 527 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 GSSP48637 474 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 USPL1Q5W0Q7 1092 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 TP63Q9H3D4 680 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-248ENST00000558190 SLCO1B3Q9NPD5 702 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 GGA3Q9NZ52 723 aa3.82□□□□□ -1.8
ATXN3-248ENST00000558190 MROH5Q6ZUA9 1318 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 GSG1L2A8MUP6 293 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 MXI1P50539 228 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NCALDP61601 193 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 N4BP2L1Q5TBK1 243 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SNX32Q86XE0 403 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 MREGQ8N565 214 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 UNC5CO95185 931 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NMT1P30419 496 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 KCTD1Q719H9 257 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 STX19Q8N4C7 294 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 RDM1Q8NG50 284 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TBCDQ9BTW9 1192 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TMEM117Q9H0C3 514 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 EPS8L2Q9H6S3 715 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PSME2Q9UL46 239 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ITGAXP20702 1163 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SMARCA2P51531 1590 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CDH15P55291 814 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF267Q14586 743 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TDRD5Q8NAT2 981 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PSMD12O00232 456 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 APOL1O14791 398 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SIN3BO75182 1162 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 FAM83EQ2M2I3 478 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 AKAP14Q86UN6 197 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SPPL2CQ8IUH8 684 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 MINDY2Q8NBR6 621 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF333Q96JL9 665 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 AGBL1Q96MI9 1066 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TRIM54Q9BYV2 358 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 POLG2Q9UHN1 485 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CDH9Q9ULB4 789 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ST14Q9Y5Y6 855 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC78A2IDD5 438 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 COQ9O75208 318 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PRKD3O94806 890 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 KPNA1P52294 538 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC142Q17RM4 750 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 FAM20AQ96MK3 541 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 KCTD14Q9BQ13 255 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 MLPHQ9BV36 600 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ASAP1Q9ULH1 1129 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CAPN8A6NHC0 703 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 LOC110117498-PIK3R3F6TDL0 507 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CEBPAP49715 358 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 FAM98BQ52LJ0 330 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PEX5LQ8IYB4 626 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF564Q8TBZ8 553 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SPIRE2Q8WWL2 714 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PCDHB2Q9Y5E7 798 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ACEP12821 1306 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms