RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 CDH16O75309 829 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 IGFBP6P24592 240 aaPredicted RBP16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 KLRC2P26717 231 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 GTF2A2P52657 109 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 BCAR1P56945 870 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 RHBDF2Q6PJF5 856 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 UBR7Q8N806 425 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 CCDC110Q8TBZ0 833 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 TMPRSS4Q9NRS4 437 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 ATP5DP30049 168 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 ROR1Q01973 937 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 SLC25A11Q02978 314 aaKnown RBP16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 TLK2Q86UE8 772 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 HASPINQ8TF76 798 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 TMEM40Q8WWA1 233 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 ATXN2LQ8WWM7 1075 aaKnown RBP16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 NSRP1Q9H0G5 558 aaKnown RBP16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 TRABDQ9H4I3 376 aa16.66■□□□□ 0.26
ATP2C1-224ENST00000533801 ZBED1O96006 694 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 IRX4P78413 519 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 HIBCHQ6NVY1 386 aaPredicted RBP16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 SYDE1Q6ZW31 735 aaPredicted RBP16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 PTPN18Q99952 460 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 OSBPL7Q9BZF2 842 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 ABCF3Q9NUQ8 709 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 STK38LQ9Y2H1 464 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 CREB3O43889 395 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 MARCH8Q5T0T0 291 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 HHATQ5VTY9 493 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 TRNP1Q6NT89 227 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 TBC1D1Q86TI0 1168 aaPredicted RBP16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 TTC30AQ86WT1 665 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 BEST2Q8NFU1 509 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 SLC2A14Q8TDB8 520 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 SMC6Q96SB8 1091 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 ASB7Q9H672 318 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 PCDHGC3Q9UN70 934 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 CAV1Q03135 178 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 PDIK1LQ8N165 341 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 KIF2BQ8N4N8 673 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 ZCCHC9Q8N567 271 aaKnown RBP16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 SERPINB12Q96P63 405 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 ABHD16BQ9H3Z7 469 aa16.65■□□□□ 0.26
ATP2C1-224ENST00000533801 TRUB2O95900 331 aaKnown RBP16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 TAP1Q03518 808 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 DUSP28Q4G0W2 176 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 VSTM1Q6UX27 236 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 NME8Q8N427 588 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 FBF1Q8TES7 1133 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 SLCO1B3Q9NPD5 702 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 MEIS3P2A8K0S8 358 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 I3L4J1 428 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 ARL4CP56559 192 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 PPP2R5DQ14738 602 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 LPPQ93052 612 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 TTLL3Q9Y4R7 772 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 A0A1B0GUA9 196 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 E2F8A0AVK6 867 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 A6NJR5 290 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 DNM1LO00429 736 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 TMEM63AO94886 807 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 PAEPP09466 180 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 KRT4P19013 534 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 RBL1P28749 1068 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 GNL1P36915 607 aaPredicted RBP16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 CEP57Q86XR8 500 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 PYROXD2Q8N2H3 581 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 CCNYQ8ND76 341 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 BCO2Q9BYV7 579 aa16.64■□□□□ 0.25
ATP2C1-224ENST00000533801 SCN1AP35498 2009 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 NOTUMQ6P988 496 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 MAMDC4Q6UXC1 1216 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 CPT1BQ92523 772 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 MS4A4AQ96JQ5 239 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 INPP5FQ9Y2H2 1132 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 MFHAS1Q9Y4C4 1052 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 BRCA1P38398 1863 aaKnown RBP16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 PPP1R2P3Q6NXS1 205 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 SLC27A1Q6PCB7 646 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 PPM1NQ8N819 430 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 PARK7Q99497 189 aaKnown RBP16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 CITO14578 2027 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 TRIP11Q15643 1979 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 DESP17661 470 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 OVGP1Q12889 678 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 ZNF268Q14587 947 aaPredicted RBP16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 DCAF6Q58WW2 860 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 PPP1R15BQ5SWA1 713 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 LDLRAD1Q5T700 205 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 CNPY3Q9BT09 278 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 ROPN1BQ9BZX4 212 aaPredicted RBP16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 AP5M1Q9H0R1 490 aa16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 ROPN1Q9HAT0 212 aaPredicted RBP16.63■□□□□ 0.25
ATP2C1-224ENST00000533801 DCTN4Q9UJW0 460 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms