RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 C2orf76Q3KRA6 126 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 CCDC58Q4VC31 144 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 CMPK2Q5EBM0 449 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 SAPCD1Q5SSQ6 148 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ANKRD20A3Q5VUR7 823 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 RNF219Q5W0B1 726 aaPredicted RBP6.82□□□□□ -1.32
SDC2-208ENST00000523877 BLOC1S2Q6QNY1 142 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ZNF783Q6ZMS7 281 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 TPGS1Q6ZTW0 290 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 RFPL4BQ6ZWI9 263 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 FJX1Q86VR8 437 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 CHD1LQ86WJ1 897 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 TBC1D19Q8N5T2 526 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ARFGAP2Q8N6H7 521 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 TTLL6Q8N841 843 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ANKRD52Q8NB46 1076 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 DDHD1Q8NEL9 900 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ZNF461Q8TAF7 563 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 METTL6Q8TCB7 284 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ZSCAN31Q96LW9 406 aaPredicted RBP6.82□□□□□ -1.32
SDC2-208ENST00000523877 FGD4Q96M96 766 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 LENG8Q96PV6 779 aaPredicted RBP6.82□□□□□ -1.32
SDC2-208ENST00000523877 C19orf43Q9BQ61 176 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 WACQ9BTA9 647 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 GPR61Q9BZJ8 451 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ARHGAP39Q9C0H5 1083 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 OR10A4Q9H209 315 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 TMEM245Q9H330 911 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 TRIT1Q9H3H1 467 aaKnown RBP6.82□□□□□ -1.32
SDC2-208ENST00000523877 GHITMQ9H3K2 345 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 RUBCNLQ9H714 662 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ARFGAP3Q9NP61 516 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 VTA1Q9NP79 307 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 SERINC1Q9NRX5 453 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 RXFP3Q9NSD7 469 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 HAUS2Q9NVX0 235 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 ASNSD1Q9NWL6 643 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 GID8Q9NWU2 228 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 UCKL1Q9NWZ5 548 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 CXXC1Q9P0U4 656 aaPredicted RBP6.82□□□□□ -1.32
SDC2-208ENST00000523877 UXTQ9UBK9 157 aaPredicted RBP6.82□□□□□ -1.32
SDC2-208ENST00000523877 VPS51Q9UID3 782 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 AURKCQ9UQB9 309 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 PARP3Q9Y6F1 533 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 INSRP06213 1382 aa6.82□□□□□ -1.32
SDC2-208ENST00000523877 MAGI3Q5TCQ9 1506 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 TNKSO95271 1327 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ZNF644Q9H582 1327 aaPredicted RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 FAM237AA0A1B0GTK4 181 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 LOC390937A0A1W2PQ73 354 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 KANSL1LA0AUZ9 987 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 H3BM21 787 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 PCDH17O14917 1159 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 SRGAP3O43295 1099 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 DOK2O60496 412 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 AOC2O75106 756 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 POU2F2P09086 479 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 TIMP2P16035 220 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ALDH4A1P30038 563 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 L1CAMP32004 1257 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 SLC19A1P41440 591 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 PTPN9P43378 593 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 RECQLP46063 649 aaPredicted RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 ME1P48163 572 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 GATMP50440 423 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 HSD17B4P51659 736 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 HIRAP54198 1017 aaPredicted RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 ZNF33BQ06732 778 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 STK4Q13043 487 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 CUL4AQ13619 759 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 SF3B4Q15427 424 aaKnown RBP eCLIP6.81□□□□□ -1.325e-9■□□□□ 9.6
SDC2-208ENST00000523877 CTC1Q2NKJ3 1217 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 PARP6Q2NL67 630 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 P3H1Q32P28 736 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 FAM209BQ5JX69 171 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 SYDE2Q5VT97 1194 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 OGFOD3Q6PK18 319 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 CYP4V2Q6ZWL3 525 aaPredicted RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 NLRP8Q86W28 1048 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 MAP7D3Q8IWC1 876 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 PLEKHM2Q8IWE5 1019 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 FAM178BQ8IXR5 827 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 MB21D2Q8IYB1 491 aaPredicted RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 PYROXD2Q8N2H3 581 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 MPP5Q8N3R9 675 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 DPP10Q8N608 796 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 NATD1Q8N6N6 113 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ZNF527Q8NB42 609 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ICA1LQ8NDH6 482 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ZMIZ2Q8NF64 920 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 GRIN3AQ8TCU5 1115 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 URGCPQ8TCY9 931 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 HCAR2Q8TDS4 363 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 SLC5A11Q8WWX8 675 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 RMND5BQ96G75 393 aaPredicted RBP6.81□□□□□ -1.32
SDC2-208ENST00000523877 TMX3Q96JJ7 454 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 AK8Q96MA6 479 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 SLC2A13Q96QE2 648 aa6.81□□□□□ -1.32
SDC2-208ENST00000523877 SETDB2Q96T68 719 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms