RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 EPHB2P29323 1055 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 SLC11A1P49279 550 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 ZNF177Q13360 481 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 RCOR2Q8IZ40 523 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 ANKRD52Q8NB46 1076 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 SPPL2BQ8TCT7 592 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 PACSIN1Q9BY11 444 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 NUMBP49757 651 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 TBX4P57082 545 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 RAD51Q06609 339 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 PDCLQ13371 301 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 CCDC85BQ15834 202 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 RABGAP1LQ5R372 815 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 SDE2Q6IQ49 451 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 PIGZQ86VD9 579 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 ZDHHC17Q8IUH5 632 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 BBOF1Q8ND07 529 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 DYRK4Q9NR20 520 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 ARHGAP20Q9P2F6 1191 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 L1RE1Q9UN81 338 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 EFCAB8A8MWE9 144 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 FAAP100Q0VG06 881 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 SMARCB1Q12824 385 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 UNC45BQ8IWX7 931 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 ATPAF2Q8N5M1 289 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 PABPC5Q96DU9 382 aaKnown RBP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 FSD1LQ9BXM9 530 aa9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 OXCT2Q9BYC2 517 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-219ENST00000495955 TRAV19A0A0A6YYK7 116 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 PPP1R12AO14974 1030 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 EDIL3O43854 480 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 FGF18O76093 207 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 CYP2F1P24903 491 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 C1QBPQ07021 282 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 SLFN11Q7Z7L1 901 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 CTAGE3PQ8IX95 158 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 MCOLN2Q8IZK6 566 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 SMG7Q92540 1137 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 IPO11Q9UI26 975 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 ANAPC5Q9UJX4 755 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 RIOK3O14730 519 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 LTFP02788 710 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 CCZ1BP86790 482 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 CCZ1P86791 482 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 SLC6A3Q01959 620 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 TWF1Q12792 350 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 DEFB106AQ8N104 65 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 PAIP2Q9BPZ3 127 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 GOLPH3Q9H4A6 298 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 RNF14Q9UBS8 474 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 INTUQ9ULD6 942 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 TSPAN3O60637 253 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 ATP2C2O75185 946 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 PPP1R37O75864 691 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 HDCP19113 662 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 GABRR2P28476 465 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 CCR1P32246 355 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 YWHAGP61981 247 aaKnown RBP eCLIP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 ROR1Q01973 937 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 ZNF268Q14587 947 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 HECTD3Q5T447 861 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 IRF2BP1Q8IU81 584 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 FAM71AQ8IYT1 594 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 SMG8Q8ND04 991 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 EPS8L1Q8TE68 723 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 GANQ9H2C0 597 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 DPEP3Q9H4B8 488 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 POPDC2Q9HBU9 364 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 ABCC13Q9NSE7 274 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 FBXL21Q9UKT6 434 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 USP27XA6NNY8 438 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 EPHB6O15197 1021 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 TYMPP19971 482 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 ATP5C1P36542 298 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 KCNT1Q5JUK3 1230 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 GET4Q7L5D6 327 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 CDKL3Q8IVW4 592 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 PDZD8Q8NEN9 1154 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 MYCBPAPQ8TBZ2 947 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 SHC3Q92529 594 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 FAF2Q96CS3 445 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 SERPINB11Q96P15 392 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 ACBD6Q9BR61 282 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 CNPY3Q9BT09 278 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 DUSP16Q9BY84 665 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 GPATCH2LQ9NWQ4 482 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 ALG6Q9Y672 507 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 KIF13BQ9NQT8 1826 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 LTBP1Q14766 1721 aa9.88□□□□□ -0.83
GAPVD1-219ENST00000495955 AP5Z1O43299 807 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 CILPO75339 1184 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 TUBBP07437 444 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 ARHGAP25P42331 645 aa9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 POU5F1Q01860 360 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-219ENST00000495955 GUCY2DQ02846 1103 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms