RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SLITRK1Q96PX8 696 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 SNX25Q9H3E2 840 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 ARHGEF4Q9NR80 690 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 CFAP97Q9P2B7 532 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 TBC1D14Q9P2M4 693 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 SIX4Q9UIU6 781 aa15.21■□□□□ 0.03
VARS-228ENST00000495010 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.21■□□□□ 0.03
VARS-228ENST00000495010 HELZP42694 1942 aaKnown RBP15.21■□□□□ 0.02
VARS-228ENST00000495010 ANAPC1Q9H1A4 1944 aa15.21■□□□□ 0.02
VARS-228ENST00000495010 TCRBV21S2A2A0A5A6 115 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 ZNF840PA6NDX5 716 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 ANTXRLA6NF34 631 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 SRRM3A6NNA2 597 aaPredicted RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 SGK1O00141 431 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 SCAMP3O14828 347 aaKnown RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 KIAA0391O15091 583 aaKnown RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 ZBTB24O43167 697 aaPredicted RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 AP5Z1O43299 807 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 PRPF6O94906 941 aaKnown RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 MBL2P11226 248 aaPredicted RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 ADH5P11766 374 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 WARSP23381 471 aaKnown RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 PTGER3P43115 390 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 TNFRSF4P43489 277 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 KDSRQ06136 332 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 IFRD2Q12894 506 aaPredicted RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 DUOXA2Q1HG44 320 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 GAB4Q2WGN9 574 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 PREPLQ4J6C6 727 aaPredicted RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 BTBD8Q5XKL5 378 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 SCARA3Q6AZY7 606 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 NUDT18Q6ZVK8 323 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 CEP76Q8TAP6 659 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 CXorf38Q8TB03 319 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 KBTBD7Q8WVZ9 684 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 PCED1BQ96HM7 432 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 FNBP1Q96RU3 617 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 GTPBP2Q9BX10 602 aaKnown RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 TMEM121BQ9BXQ6 578 aaPredicted RBP15.2■□□□□ 0.02
VARS-228ENST00000495010 RNF38Q9H0F5 515 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 CRTAC1Q9NQ79 661 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 OLFML3Q9NRN5 406 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 INTS13Q9NVM9 706 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 NEUROG3Q9Y4Z2 214 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 CFAP47Q6ZTR5 3102 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 CEP295Q9C0D2 2601 aa15.2■□□□□ 0.02
VARS-228ENST00000495010 ATXN2Q99700 1313 aaKnown RBP15.19■□□□□ 0.02
VARS-228ENST00000495010 TBC1D3BA6NDS4 549 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 ZNF233A6NK53 670 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 F8VP50 259 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 HYAL3O43820 417 aaPredicted RBP15.19■□□□□ 0.02
VARS-228ENST00000495010 HNRNPLP14866 589 aaKnown RBP eCLIP15.19■□□□□ 0.02
VARS-228ENST00000495010 GNL1P36915 607 aaPredicted RBP15.19■□□□□ 0.02
VARS-228ENST00000495010 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
VARS-228ENST00000495010 SIM1P81133 766 aaPredicted RBP15.19■□□□□ 0.02
VARS-228ENST00000495010 GAD2Q05329 585 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 GFPT1Q06210 699 aaPredicted RBP15.19■□□□□ 0.02
VARS-228ENST00000495010 TAF10Q12962 218 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 DUOXA1Q1HG43 343 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 EMC10Q5UCC4 262 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 SLC23A3Q6PIS1 610 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 RHBDF2Q6PJF5 856 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 STXBP4Q6ZWJ1 553 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 USP49Q70CQ1 688 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 TRMT11Q7Z4G4 463 aaKnown RBP15.19■□□□□ 0.02
VARS-228ENST00000495010 FRMD1Q8N878 549 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 OR6B3Q8NGW1 331 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 DNAJC19Q96DA6 116 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 C8orf48Q96LL4 319 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 TTLL2Q9BWV7 592 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 TMEM74BQ9NUR3 256 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 PANK4Q9NVE7 773 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 MBD1Q9UIS9 605 aaPredicted RBP15.19■□□□□ 0.02
VARS-228ENST00000495010 SLC6A14Q9UN76 642 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 MSRB2Q9Y3D2 182 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 FAM208BQ5VWN6 2430 aa15.19■□□□□ 0.02
VARS-228ENST00000495010 SPAARA0A1B0GVQ0 90 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 H0Y626 953 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 OPHN1O60890 802 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 TRIM16O95361 564 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 HOXD12P35452 270 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 CASP5P51878 434 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 RPL6Q02878 288 aaKnown RBP15.18■□□□□ 0.02
VARS-228ENST00000495010 MAP7D1Q3KQU3 841 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 SLC36A4Q6YBV0 504 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 CCDC73Q6ZRK6 1079 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 RABEPKQ7Z6M1 372 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 C12orf40Q86WS4 652 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 SFTPA1Q8IWL2 248 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 OR5B17Q8NGF7 314 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 ZDHHC4Q9NPG8 344 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 PILRBQ9UKJ0 227 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 SH3BP1Q9Y3L3 701 aa15.18■□□□□ 0.02
VARS-228ENST00000495010 A0A0A0MRY4 1105 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 E2F8A0AVK6 867 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 OLFM2O95897 454 aa15.17■□□□□ 0.02
VARS-228ENST00000495010 OAS1P00973 400 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms