RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 EPM2AIP1Q7L775 607 aaPredicted RBP9.12□□□□□ -0.95
PRKCB-208ENST00000487674 KIAA1958Q8N8K9 716 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 ARL14EPQ8N8R7 260 aaPredicted RBP9.12□□□□□ -0.95
PRKCB-208ENST00000487674 LINC00301Q8NCQ3 95 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 TTC16Q8NEE8 873 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 RPLP0P6Q8NHW5 317 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 CCDC26Q8TAB7 109 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 SH3RF2Q8TEC5 729 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 EZH1Q92800 747 aaPredicted RBP9.12□□□□□ -0.95
PRKCB-208ENST00000487674 PCED1BQ96HM7 432 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 ZC3H10Q96K80 434 aaKnown RBP9.12□□□□□ -0.95
PRKCB-208ENST00000487674 CYP2S1Q96SQ9 504 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 TTLL2Q9BWV7 592 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 TRIM9Q9C026 710 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 ARRDC1-AS1Q9H2J1 176 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 AGPAT3Q9NRZ7 376 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 KBTBD4Q9NVX7 518 aa9.12□□□□□ -0.95
PRKCB-208ENST00000487674 MAGEC2Q9UBF1 373 aaPredicted RBP9.12□□□□□ -0.95
PRKCB-208ENST00000487674 MAP1BP46821 2468 aaKnown RBP9.12□□□□□ -0.95
PRKCB-208ENST00000487674 SPTLC2O15270 562 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 PPP6R2O75170 966 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 TACC1O75410 805 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 DLATP10515 647 aaKnown RBP9.11□□□□□ -0.95
PRKCB-208ENST00000487674 HDCP19113 662 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 BDNFP23560 247 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 HOXD13P35453 343 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 GRIK1P39086 918 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 MPLP40238 635 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 PPP3CCP48454 512 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 USP46P62068 366 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 NOP14P78316 857 aaKnown RBP9.11□□□□□ -0.95
PRKCB-208ENST00000487674 ASIC1P78348 528 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 AMPD3Q01432 767 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 CYP27A1Q02318 531 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 DMC1Q14565 340 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 PSMD6Q15008 389 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 SF3A2Q15428 464 aaKnown RBP9.11□□□□□ -0.95
PRKCB-208ENST00000487674 ELF2Q15723 593 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 SNRNP35Q16560 246 aaKnown RBP9.11□□□□□ -0.95
PRKCB-208ENST00000487674 PLK5Q496M5 336 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 PLA2G2CQ5R387 149 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 FAM26FQ5R3K3 315 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 SMYD5Q6GMV2 418 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 TRAPPC11Q7Z392 1133 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 HPS3Q969F9 1004 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 C8orf48Q96LL4 319 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 FNBP1Q96RU3 617 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 MMS19Q96T76 1030 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 CGRRF1Q99675 332 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 ELOVL4Q9GZR5 314 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 SNX25Q9H3E2 840 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 MAGEF1Q9HAY2 307 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 POLR3BQ9NW08 1133 aaPredicted RBP9.11□□□□□ -0.95
PRKCB-208ENST00000487674 TRPM5Q9NZQ8 1165 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 EBF1Q9UH73 591 aa9.11□□□□□ -0.95
PRKCB-208ENST00000487674 F8VP50 259 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
PRKCB-208ENST00000487674 LEFTY2O00292 366 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 TGFB1I1O43294 461 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 YEATS4O95619 227 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 OLFM2O95897 454 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 OAS1P00973 400 aaKnown RBP9.1□□□□□ -0.95
PRKCB-208ENST00000487674 PDGFRBP09619 1106 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 FAM163BP0C2L3 166 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 TNNI1P19237 187 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 GNL1P36915 607 aaPredicted RBP9.1□□□□□ -0.95
PRKCB-208ENST00000487674 OPRD1P41143 372 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 CYP2J2P51589 502 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 SNRPFP62306 86 aaKnown RBP9.1□□□□□ -0.95
PRKCB-208ENST00000487674 TNNC1P63316 161 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 SLC7A9P82251 487 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 CYP24A1Q07973 514 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 EHHADHQ08426 723 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 PSMD2Q13200 908 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 CCDC6Q16204 474 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 MDH1BQ5I0G3 518 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 HS2ST1Q7LGA3 356 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 C11orf74Q86VG3 221 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 IQUBQ8NA54 791 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 TSTD1Q8NFU3 115 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 ZNF507Q8TCN5 953 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 USP33Q8TEY7 942 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 DHX58Q96C10 678 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 ZNF396Q96N95 335 aaPredicted RBP9.1□□□□□ -0.95
PRKCB-208ENST00000487674 MRPL45Q9BRJ2 306 aaKnown RBP9.1□□□□□ -0.95
PRKCB-208ENST00000487674 DUSP15Q9H1R2 295 aaPredicted RBP9.1□□□□□ -0.95
PRKCB-208ENST00000487674 VPS45Q9NRW7 570 aa9.1□□□□□ -0.95
PRKCB-208ENST00000487674 ZNF840PA6NDX5 716 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 SLC9A3R1O14745 358 aaPredicted RBP9.09□□□□□ -0.95
PRKCB-208ENST00000487674 CUTAO60888 179 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 RHOBTB1O94844 696 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 STAU1O95793 577 aaKnown RBP9.09□□□□□ -0.95
PRKCB-208ENST00000487674 CYP17A1P05093 508 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 ATICP31939 592 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 EIF2DP41214 584 aaKnown RBP9.09□□□□□ -0.95
PRKCB-208ENST00000487674 ZXDBP98169 803 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 BMT2Q1RMZ1 405 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 GAB4Q2WGN9 574 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 WDR72Q3MJ13 1102 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms