RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 CXorf56Q9H5V9 222 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 PANK3Q9H999 370 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.56□□□□□ -1.68
CMSS1-204ENST00000479555 KDM5DQ9BY66 1539 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 RALGAPBQ86X10 1494 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 TEX14Q8IWB6 1497 aa4.56□□□□□ -1.68
CMSS1-204ENST00000479555 LOC102724159A0A0B4J2E5 919 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 CCDC154A6NI56 674 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 MYO1CO00159 1063 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 HTRA2O43464 458 aaPredicted RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 BMP15O95972 392 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 TUBBP07437 444 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 PDHA1P08559 390 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 MTHFD1P11586 935 aaKnown RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 LPOP22079 712 aaPredicted RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 PCSK6P29122 969 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 NPTX2P47972 431 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 CCT8P50990 548 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 SOX10P56693 466 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 PWP2Q15269 919 aaKnown RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 ATAT1Q5SQI0 421 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 KIAA1614Q5VZ46 1190 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 SLC2A7Q6PXP3 512 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 TTC7BQ86TV6 843 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 KIAA1524Q8TCG1 905 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 RFKQ969G6 155 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 ITFG2Q969R8 447 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 EXOC4Q96A65 974 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 C1GALT1C1Q96EU7 318 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 LRGUKQ96M69 825 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 FCRL4Q96PJ5 515 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 SUDS3Q9H7L9 328 aaPredicted RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 PRDM11Q9NQV5 511 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 MAN1C1Q9NR34 630 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 KLC4Q9NSK0 619 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 TDP1Q9NUW8 608 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 JKAMPQ9P055 326 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 SH3BP4Q9P0V3 963 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 KDM5CP41229 1560 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 EHBP1L1Q8N3D4 1523 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 TCOF1Q13428 1488 aaKnown RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 IFT140Q96RY7 1462 aa4.55□□□□□ -1.68
CMSS1-204ENST00000479555 SUPT6HQ7KZ85 1726 aaKnown RBP4.55□□□□□ -1.68
CMSS1-204ENST00000479555 E9PCH4 1651 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 GPRASP1Q5JY77 1395 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 TDRD9Q8NDG6 1382 aaKnown RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 ANKRD18BA2A2Z9 1011 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 TRIM38O00635 465 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 SLC16A6O15403 523 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 PRC1O43663 620 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 AP1G1O43747 822 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 SGTAO43765 313 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 CTNND1O60716 968 aaKnown RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 SLC43A1O75387 559 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 LATS1O95835 1130 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 CYP2D6P10635 497 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 CAPN2P17655 700 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 CHRM3P20309 590 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 EIF5P55010 431 aaKnown RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 HNRNPH2P55795 449 aaKnown RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 ITIH3Q06033 890 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 NCBP1Q09161 790 aaKnown RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 OS9Q13438 667 aaPredicted RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 IL10RAQ13651 578 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 PDCD2Q16342 344 aaPredicted RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 ZSCAN26Q16670 478 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 PGS1Q32NB8 556 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 ARHGAP29Q52LW3 1261 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 CEP78Q5JTW2 689 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 TMCO3Q6UWJ1 677 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 MMS22LQ6ZRQ5 1243 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 ZNF365Q70YC5 407 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 EPM2AIP1Q7L775 607 aaPredicted RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 C14orf80Q86SX3 495 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 KIAA1328Q86T90 577 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 SRLQ86TD4 932 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 TTC8Q8TAM2 541 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 SLC35G2Q8TBE7 412 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 DNAAF4Q8WXU2 420 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 HPS3Q969F9 1004 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 RPL36ALQ969Q0 106 aaKnown RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 MVB12AQ96EY5 273 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 PBKQ96KB5 322 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 TRIB1Q96RU8 372 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 TPSD1Q9BZJ3 242 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 A1CFQ9NQ94 594 aaKnown RBP4.54□□□□□ -1.68
CMSS1-204ENST00000479555 C1orf112Q9NSG2 853 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 SLC52A1Q9NWF4 448 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 SERPINB13Q9UIV8 391 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 SUFUQ9UMX1 484 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 LIMCH1Q9UPQ0 1083 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 POLHQ9Y253 713 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 BTBD3Q9Y2F9 522 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 IPPQ9Y573 584 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 CHD1O14646 1710 aa4.54□□□□□ -1.68
CMSS1-204ENST00000479555 ANKRD30BQ9BXX2 1392 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 SYNMO15061 1565 aa4.53□□□□□ -1.68
CMSS1-204ENST00000479555 KAT6AQ92794 2004 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms