RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 GABRDO14764 452 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 PPEF2O14830 753 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 TRIM66O15016 1216 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 NPC1O15118 1278 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 HOXC11O43248 304 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 HUS1O60921 280 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 CBFA2T3O75081 653 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 KLF8O95600 359 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 CYP17A1P05093 508 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 ITPKAP23677 461 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 U2AF2P26368 475 aaKnown RBP eCLIP7.29□□□□□ -1.249e-8■■■■□ 19.9
SF3A3-205ENST00000470585 TNFSF9P41273 254 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 SLC12A3P55017 1021 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 NOP14P78316 857 aaKnown RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 GTF2BQ00403 316 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 RPL6Q02878 288 aaKnown RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 RESTQ13127 1097 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 DHCR24Q15392 516 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 ZNF174Q15697 407 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 SEZ6Q53EL9 994 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 WSCD1Q658N2 575 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 ARL6IP4Q66PJ3 421 aaKnown RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 NAIF1Q69YI7 327 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 DTHD1Q6ZMT9 781 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 DBX2Q6ZNG2 339 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 NAXDQ8IW45 347 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 ALLCQ8N6M5 410 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 TXNDC5Q8NBS9 432 aaKnown RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 ENGASEQ8NFI3 743 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 FBXO18Q8NFZ0 1043 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 CACTINQ8WUQ7 758 aaKnown RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 DNASE2BQ8WZ79 361 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 OVCA2Q8WZ82 227 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 C8orf76Q96K31 380 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 AK8Q96MA6 479 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 YTHDC1Q96MU7 727 aaKnown RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 LARP6Q9BRS8 491 aaKnown RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 PARVGQ9HBI0 331 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 POLR3BQ9NW08 1133 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 DPP3Q9NY33 737 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 TRPM5Q9NZQ8 1165 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 ITGA11Q9UKX5 1188 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 MAGED2Q9UNF1 606 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-205ENST00000470585 PTPRBP23467 1997 aa7.29□□□□□ -1.24
SF3A3-205ENST00000470585 CELSR3Q9NYQ7 3312 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 IGHV1OR15-9A0A0B4J2B8 117 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 TCRBV21S2A2A0A5A6 115 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 SGK1O00141 431 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 LEFTY2O00292 366 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 FLRT2O43155 660 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 CER1O95813 267 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 OAS1P00973 400 aaKnown RBP7.28□□□□□ -1.24
SF3A3-205ENST00000470585 ADH5P11766 374 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 NTSR1P30989 418 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 TUBP50607 506 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 GAD2Q05329 585 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 SPAG1Q07617 926 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 ME3Q16798 604 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 BTBD8Q5XKL5 378 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 FAM171BQ6P995 826 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 LIMS2Q7Z4I7 341 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 SPATA2LQ8IUW3 424 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-205ENST00000470585 ETFBKMTQ8IXQ9 262 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 PHTF2Q8N3S3 785 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 PDCL2Q8N4E4 241 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 CCDC33Q8N5R6 958 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 ARL14EPQ8N8R7 260 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-205ENST00000470585 PDZD8Q8NEN9 1154 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 CADM4Q8NFZ8 388 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 BAHD1Q8TBE0 780 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-205ENST00000470585 HMGB4Q8WW32 186 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 MMTAG2Q9BU76 263 aaKnown RBP7.28□□□□□ -1.24
SF3A3-205ENST00000470585 GTPBP2Q9BX10 602 aaKnown RBP7.28□□□□□ -1.24
SF3A3-205ENST00000470585 LINC00597Q9H2U6 94 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 POLD4Q9HCU8 107 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 TRPC7Q9HCX4 862 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 ARHGEF4Q9NR80 690 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 DDX43Q9NXZ2 648 aaKnown RBP7.28□□□□□ -1.24
SF3A3-205ENST00000470585 PCOLCE2Q9UKZ9 415 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 INVSQ9Y283 1065 aa7.28□□□□□ -1.24
SF3A3-205ENST00000470585 A0A1B0GTW7 788 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 C2orf78A6NCI8 922 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 ZNF840PA6NDX5 716 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 SFI1A8K8P3 1242 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 KIAA0391O15091 583 aaKnown RBP7.27□□□□□ -1.25
SF3A3-205ENST00000470585 ATXN7O15265 892 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-205ENST00000470585 SH3BP5O60239 455 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 TRAK2O60296 914 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 ADAM23O75077 832 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 LDHAP00338 332 aaKnown RBP7.27□□□□□ -1.25
SF3A3-205ENST00000470585 PLA2G4BP0C869 781 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 HNRNPLP14866 589 aaKnown RBP eCLIP7.27□□□□□ -1.252e-6■□□□□ 8.9
SF3A3-205ENST00000470585 GABRG2P18507 467 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 CYP2F1P24903 491 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 GUCY2FP51841 1108 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 SEC13P55735 322 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 FAM193AP78312 1265 aa7.27□□□□□ -1.25
SF3A3-205ENST00000470585 GNL2Q13823 731 aaKnown RBP7.27□□□□□ -1.25
SF3A3-205ENST00000470585 SUZ12Q15022 739 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms