RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 DHRS4L1P0CG22 281 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 ARP10275 920 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 STIP1P31948 543 aaKnown RBP8.29□□□□□ -1.08
TPM3-215ENST00000469717 SREBF1P36956 1147 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CCR3P51677 355 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 PSMC5P62195 406 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 NFIAQ12857 509 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 PDK1Q15118 436 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 KCNT1Q5JUK3 1230 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 LRRC8BQ6P9F7 803 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 POLNQ7Z5Q5 900 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 RHOT1Q8IXI2 618 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 PALM2Q8IXS6 379 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 XXYLT1Q8NBI6 393 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 GRIN3AQ8TCU5 1115 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 ARPC5LQ9BPX5 153 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 APOL6Q9BWW8 343 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 CNTN3Q9P232 1028 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 LZTS1Q9Y250 596 aa8.29□□□□□ -1.08
TPM3-215ENST00000469717 TLR3O15455 904 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 TRPA1O75762 1119 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 STT3AP46977 705 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 GRM2Q14416 872 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 EFHC1Q5JVL4 640 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 GPATCH4Q5T3I0 446 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 VWA5B1Q5TIE3 1220 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 KLHL35Q6PF15 583 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 ATG14Q6ZNE5 492 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 ZBTB46Q86UZ6 589 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 CTAGE3PQ8IX95 158 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 DGCR14Q96DF8 476 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 FAM20AQ96MK3 541 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 NAP1L4Q99733 375 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 CCDC106Q9BWC9 280 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 UNC45AQ9H3U1 944 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 ACSS3Q9H6R3 686 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 INIPQ9NRY2 104 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 SERPINB13Q9UIV8 391 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 STRIP2Q9ULQ0 834 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 ARHGEF35A5YM69 484 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 CXorf49A8MYA2 514 aaPredicted RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 TM9SF1O15321 606 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 PEX1O43933 1283 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 RFX1P22670 979 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 NSFP46459 744 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 PSMD7P51665 324 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 ZNF252P-AS1Q0IIN9 211 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 MAMLD1Q13495 774 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 HIC1Q14526 733 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 SNRNP35Q16560 246 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 TMCO4Q5TGY1 634 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 C1orf228Q6PIY5 440 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 TMIGD2Q96BF3 282 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 SLITRK1Q96PX8 696 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 MIS12Q9H081 205 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 DOLKQ9UPQ8 538 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 TCRBV9S1A1TA0A576 114 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 TRIM49D1C9J1S8 452 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 KBTBD13C9JR72 458 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 GAS7O60861 476 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 ELK3P41970 407 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 MRPS5P82675 430 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 MORF4L2Q15014 288 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 NFIL3Q16649 462 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 ANKDD1AQ495B1 522 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 ANKRD20A4Q4UJ75 823 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 SLFN13Q68D06 897 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 CCDC174Q6PII3 467 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 PADI6Q6TGC4 694 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 B3GNT6Q6ZMB0 384 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 AMIGO2Q86SJ2 522 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 SENP7Q9BQF6 1050 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 TUBB6Q9BUF5 446 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 MRPL1Q9BYD6 325 aaKnown RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 PTTG2Q9NZH5 202 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 IL1RAPL1Q9NZN1 696 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
TPM3-215ENST00000469717 EP400Q96L91 3159 aa8.28□□□□□ -1.08
TPM3-215ENST00000469717 E2F8A0AVK6 867 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 TMX2-CTNND1H3BSU7 103 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 ITM2AO43736 263 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 PSMD10O75832 226 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 MAP3K6O95382 1288 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 RGS2P41220 211 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 NCKAP1LP55160 1127 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 PEX3P56589 373 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 WNT7BP56706 349 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 BASP1P80723 227 aaKnown RBP8.27□□□□□ -1.08
TPM3-215ENST00000469717 OGDHQ02218 1023 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 OASLQ15646 514 aaKnown RBP8.27□□□□□ -1.08
TPM3-215ENST00000469717 KCTD21Q4G0X4 260 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 SH2D5Q6ZV89 423 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 SV2AQ7L0J3 742 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 RNF148Q8N7C7 305 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 PPM1NQ8N819 430 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 ATP11CQ8NB49 1132 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 APOPT1Q96IL0 206 aa8.27□□□□□ -1.08
TPM3-215ENST00000469717 NT5C1BQ96P26 610 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms