RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 INO80DQ53TQ3 878 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 PRR16Q569H4 304 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 CERCAMQ5T4B2 595 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TMTC4Q5T4D3 741 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ARHGAP40Q5TG30 622 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 RRAGBQ5VZM2 374 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ARL6IP4Q66PJ3 421 aaKnown RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 RAP1GAP2Q684P5 730 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 RGS7BPQ6MZT1 257 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 MRNIPQ6NTE8 343 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 PGBD2Q6P3X8 592 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TLDC1Q6P9B6 456 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 CRTC1Q6UUV9 634 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TSHZ1Q6ZSZ6 1077 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 USP49Q70CQ1 688 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 CCDC28AQ8IWP9 274 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC15A3Q8IY34 581 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 CACNA2D3Q8IZS8 1091 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TXLNBQ8N3L3 684 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 DNAJB14Q8TBM8 379 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 MYCBPAPQ8TBZ2 947 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ATG4AQ8WYN0 398 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 RFKQ969G6 155 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 CTHRC1Q96CG8 243 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 PTCD3Q96EY7 689 aaKnown RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 PGBD1Q96JS3 809 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ZNF668Q96K58 619 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 WDR24Q96S15 920 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 GBA2Q9HCG7 927 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TRIM36Q9NQ86 728 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 HEYLQ9NQ87 328 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 RXFP3Q9NSD7 469 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TBC1D23Q9NUY8 699 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TBCCD1Q9NVR7 557 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ANKFY1Q9P2R3 1169 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 HDAC9Q9UKV0 1011 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC39A10Q9ULF5 831 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ZMYND8Q9ULU4 1186 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 CA14Q9ULX7 337 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 GABRQQ9UN88 632 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 SH2B3Q9UQQ2 575 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 EPN1Q9Y6I3 576 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 M0R3H8 397 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SYT5O00445 386 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 PPM1DO15297 605 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 YY2O15391 372 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC16A3O15427 465 aaKnown RBP2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 PIP5K1CO60331 668 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 TLR5O60602 858 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 PIAS2O75928 621 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ESRRBO95718 433 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 CSTBP04080 98 aaKnown RBP2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 VEGFAP15692 232 aaPredicted RBP2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 KRT4P19013 534 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 MST1P26927 711 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ADORA2AP29274 412 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 EPHA3P29320 983 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 HTR7P34969 479 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 TRAPPC10P48553 1259 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 MAPK10P53779 464 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 KRT17Q04695 432 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ICA1Q05084 483 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 FOXI1Q12951 378 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 MTAPQ13126 283 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ATP1A4Q13733 1029 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SPARCL1Q14515 664 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 CLCA4Q14CN2 919 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ACOX1Q15067 660 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 PFKFB4Q16877 469 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 NBPF8Q3BBV2 869 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 TMEM95Q3KNT9 176 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ZACNQ401N2 412 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 LY6G5CQ5SRR4 150 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ABLIM2Q6H8Q1 611 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 TANGO2Q6ICL3 276 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 MZT2AQ6P582 158 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 Q6YL49 198 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 MAVSQ7Z434 540 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 MYLK4Q86YV6 388 aaPredicted RBP2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 EXOC8Q8IYI6 725 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 IZUMO1Q8IYV9 350 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SYNE4Q8N205 404 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 VPS37AQ8NEZ2 397 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 MBD3L2Q8NHZ7 208 aaPredicted RBP2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SUN3Q8TAQ9 357 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 STT3BQ8TCJ2 826 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 PROKR1Q8TCW9 393 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SOCS4Q8WXH5 440 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 RSC1A1Q92681 617 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 LRRC46Q96FV0 321 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 Q96MF0 132 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 PSMD1Q99460 953 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 AIFM2Q9BRQ8 373 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 HERPUD2Q9BSE4 406 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 THAP7Q9BT49 309 aaPredicted RBP2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ACTRT3Q9BYD9 372 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 PCDHAC1Q9H158 963 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 MYH16Q9H6N6 1097 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms