RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 AP5Z1O43299 807 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 APODP05090 189 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 PFKLP17858 780 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 GABRG2P18507 467 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 RDXP35241 583 aaKnown RBP18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 TNFRSF4P43489 277 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 HMGN5P82970 282 aaKnown RBP18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 MYL7Q01449 175 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 RPL6Q02878 288 aaKnown RBP18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 KDSRQ06136 332 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 ZNF33AQ06730 810 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 RESTQ13127 1097 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 BYSLQ13895 437 aaKnown RBP18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 DHX8Q14562 1220 aaKnown RBP18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 TRIP6Q15654 476 aaKnown RBP18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 SLFN12LQ6IEE8 588 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 KIAA1958Q8N8K9 716 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 SPATA17Q96L03 361 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 TTLL2Q9BWV7 592 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 CD248Q9HCU0 757 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 ARHGEF4Q9NR80 690 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 CPQQ9Y646 472 aa18.4■□□□□ 0.54
UBE2D4-209ENST00000454428 ZNF840PA6NDX5 716 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 HUS1O60921 280 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 IL18RAPO95256 599 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 FTH1P19P0C7X4 201 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 GRIA2P42262 883 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 TFAMQ00059 246 aaKnown RBP18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 HNRNPDQ14103 355 aaKnown RBP18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 MCM6Q14566 821 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 SOWAHAQ2M3V2 549 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 LIMS2Q7Z4I7 341 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 ADGRF2Q8IZF7 708 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 PGBD3Q8N328 593 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 LRRC52Q8N7C0 313 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 FAM184AQ8NB25 1140 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 MDM1Q8TC05 714 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 MYLPFQ96A32 169 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 ST6GALNAC4Q9H4F1 302 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 CRTAC1Q9NQ79 661 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 SMPD4Q9NXE4 827 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 CALCOCO1Q9P1Z2 691 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 SIX4Q9UIU6 781 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 SNX9Q9Y5X1 595 aa18.39■□□□□ 0.53
UBE2D4-209ENST00000454428 IGHV1OR15-9A0A0B4J2B8 117 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 SEC24BO95487 1268 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 OAS1P00973 400 aaKnown RBP18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 PLCG1P19174 1290 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 BDNFP23560 247 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 LMO2P25791 158 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 PDE6CP51160 858 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 PSMC1P62191 440 aaKnown RBP18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 MIB1Q86YT6 1006 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 ETFBKMTQ8IXQ9 262 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 TOP6BLQ8N6T0 577 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 HNRNPLLQ8WVV9 542 aaKnown RBP18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 KBTBD7Q8WVZ9 684 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 POMGNT1Q8WZA1 660 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 STRA6Q9BX79 667 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 ZHX3Q9H4I2 956 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 CCDC86Q9H6F5 360 aaKnown RBP18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 TRPM5Q9NZQ8 1165 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 CFAP97Q9P2B7 532 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 RAXQ9Y2V3 346 aa18.38■□□□□ 0.53
UBE2D4-209ENST00000454428 A0A1W2PQF6 199 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 PPP1R37O75864 691 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 ADH5P11766 374 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 PCSK1P29120 753 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 LHX1P48742 406 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 KCNA1Q09470 495 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 SLC14A1Q13336 389 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 VSTM1Q6UX27 236 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 SLC36A4Q6YBV0 504 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 DENND5BQ6ZUT9 1274 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 SLCO6A1Q86UG4 719 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 BRSK2Q8IWQ3 736 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 CD93Q9NPY3 652 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 ASXL3Q9C0F0 2248 aa18.37■□□□□ 0.53
UBE2D4-209ENST00000454428 A0A1W2PQD8 194 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 SLC9A3R1O14745 358 aaPredicted RBP18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 CBFA2T3O75081 653 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 ADH1CP00326 375 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 ABCD1P33897 745 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 LY6G5CQ5SRR4 150 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 ARL6IP4Q66PJ3 421 aaKnown RBP18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 ZNF720Q7Z2F6 126 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 RABEPKQ7Z6M1 372 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 NAXDQ8IW45 347 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 CSGALNACT2Q8N6G5 542 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 RAD54LQ92698 747 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 SAAL1Q96ER3 474 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 ZFRQ96KR1 1074 aaKnown RBP18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 SYT15Q9BQS2 421 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 FAM213AQ9BRX8 229 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 TMEM30AQ9NV96 361 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 MAGEC2Q9UBF1 373 aaPredicted RBP18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 ITGA11Q9UKX5 1188 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 NME7Q9Y5B8 376 aa18.36■□□□□ 0.53
UBE2D4-209ENST00000454428 TRIM24O15164 1050 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 SLC26A4O43511 780 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms