RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 FOXN3O00409 490 aaPredicted RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 RECQL4O94761 1208 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 ENDOD1O94919 500 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 CSTBP04080 98 aaKnown RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 AMY1AP04745 511 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 SMARCA1P28370 1054 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 PDIA3P30101 505 aaKnown RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 MCM7P33993 719 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 TMF1P82094 1093 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 TLE1Q04724 770 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 SIM2Q14190 667 aaPredicted RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 SLC35G1Q2M3R5 365 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 ARL13BQ3SXY8 428 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 FLYWCH1Q4VC44 716 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 GJC2Q5T442 439 aaPredicted RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 EFCAB12Q6NXP0 572 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 ZNF572Q7Z3I7 529 aaPredicted RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 PPP1R3BQ86XI6 285 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 PQLC1Q8N2U9 271 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 ZNF276Q8N554 614 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 RNF169Q8NCN4 708 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 OR10H5Q8NGA6 315 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 SLC25A43Q8WUT9 341 aaPredicted RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 BRI3BPQ8WY22 251 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 IP6K1Q92551 441 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 TFAP2CQ92754 450 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 C18orf8Q96DM3 657 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 FAM167AQ96KS9 214 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 MRGPRX1Q96LB2 322 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 UHRF1Q96T88 793 aaPredicted RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 P2RX7Q99572 595 aaKnown RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 PCED1AQ9H1Q7 454 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 ZNF768Q9H5H4 540 aaKnown RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 NRDE2Q9H7Z3 1164 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 MANSC1Q9H8J5 431 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 SARS2Q9NP81 518 aaKnown RBP5.08□□□□□ -1.6
LINC00393-202ENST00000452852 ZNF69Q9UC07 566 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 CLCA2Q9UQC9 943 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 CEP83Q9Y592 693 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 TUBGCP6Q96RT7 1819 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 LY75O60449 1722 aa5.08□□□□□ -1.6
LINC00393-202ENST00000452852 ANKRD36BQ8N2N9 1353 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 MAP2P11137 1827 aaKnown RBP5.07□□□□□ -1.6
LINC00393-202ENST00000452852 CXorf49A8MYA2 514 aaPredicted RBP5.07□□□□□ -1.6
LINC00393-202ENST00000452852 AHRRA9YTQ3 701 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 ISM1B1AKI9 464 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 PRRT4C9JH25 899 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 TRIM24O15164 1050 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 ARIH2O95376 493 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 AHSGP02765 367 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 PYGLP06737 847 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 ALOX15P16050 662 aaPredicted RBP5.07□□□□□ -1.6
LINC00393-202ENST00000452852 MAKP20794 623 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 NR4A1P22736 598 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 SLC15A2Q16348 729 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 JAKMIP3Q5VZ66 844 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 DRICH1Q6PGQ1 229 aaPredicted RBP5.07□□□□□ -1.6
LINC00393-202ENST00000452852 PTF1AQ7RTS3 328 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 TXLNBQ8N3L3 684 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 IFI44Q8TCB0 444 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 GCC1Q96CN9 775 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 MPP4Q96JB8 637 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 ISCA1Q9BUE6 129 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 C1orf43Q9BWL3 253 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 CNNM1Q9NRU3 951 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 CALCOCO1Q9P1Z2 691 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 COL20A1Q9P218 1284 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 GRHPRQ9UBQ7 328 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 FEZ2Q9UHY8 353 aaPredicted RBP5.07□□□□□ -1.6
LINC00393-202ENST00000452852 C5P01031 1676 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 PAPPAQ13219 1627 aa5.07□□□□□ -1.6
LINC00393-202ENST00000452852 RTL1A6NKG5 1358 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 USP47Q96K76 1375 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 PNPLA7Q6ZV29 1317 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 FFAR2O15552 330 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 PJA2O43164 708 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 HSD3B1P14060 373 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 HDCP19113 662 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 HMGB2P26583 209 aaKnown RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 HOXC9P31274 260 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 GUCY1A2P33402 732 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 ALDH9A1P49189 494 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 RNASE9P60153 205 aaKnown RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 FAM189BP81408 668 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 HTRA4P83105 476 aaPredicted RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 NHLH2Q02577 135 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 GALNT1Q10472 559 aaPredicted RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 PPFIA1Q13136 1202 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 SP140Q13342 867 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 FHL2Q14192 279 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 RAB39AQ14964 217 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 SUGP1Q8IWZ8 645 aaKnown RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 ATG16L2Q8NAA4 619 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 ATP11CQ8NB49 1132 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 ZFP28Q8NHY6 868 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 NEU4Q8WWR8 484 aaPredicted RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 RAPGEF4Q8WZA2 1011 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 HAS1Q92839 578 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 ZNF566Q969W8 418 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 TESK2Q96S53 571 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms