RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SRGAP2O75044 1071 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 FGF18O76093 207 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 URI1O94763 535 aaPredicted RBP4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 ONECUT2O95948 504 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 PDHA1P08559 390 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 MYL4P12829 197 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 BMP5P22003 454 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 PRKAR1BP31321 381 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 HTR3AP46098 478 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 PTH2RP49190 550 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 MAPK10P53779 464 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 BCAT1P54687 386 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 SP2Q02086 613 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 EIF2B5Q13144 721 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 PMS2P11Q13670 270 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 BMPR2Q13873 1038 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 ERCC6LQ2NKX8 1250 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 ZNF750Q32MQ0 723 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 PLAC9Q5JTB6 97 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 DEPDC1Q5TB30 811 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 PLAG1Q6DJT9 500 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 HIBCHQ6NVY1 386 aaPredicted RBP4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 KRT28Q7Z3Y7 464 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 MAVSQ7Z434 540 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 ABRAQ8N0Z2 381 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 VGLL2Q8N8G2 317 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 DNAJB14Q8TBM8 379 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 MORC4Q8TE76 937 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 SLC39A13Q96H72 371 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 SGCZQ96LD1 299 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 MAGEB5Q9BZ81 275 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 CERS4Q9HA82 394 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 TBC1D23Q9NUY8 699 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 DKK4Q9UBT3 224 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 RIPOR2Q9Y4F9 1068 aa4.4□□□□□ -1.7
TRAPPC13-204ENST00000438419 NCK2O43639 380 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 LDHAP00338 332 aaKnown RBP4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 IDEP14735 1019 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 ZFXP17010 805 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 ADORA2AP29274 412 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 EPHA3P29320 983 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 GRIA3P42263 894 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 INHBEP58166 350 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 SMN1Q16637 294 aaKnown RBP4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 PTCHD3Q3KNS1 767 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 ARL13BQ3SXY8 428 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 DGKKQ5KSL6 1271 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 GORABQ5T7V8 394 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 USP17L6PQ6QN14 398 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 TOGARAM2Q6ZUX3 1019 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 ZNF551Q7Z340 670 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 KCTD20Q7Z5Y7 419 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 PEG10Q86TG7 708 aaKnown RBP4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 MORC1Q86VD1 984 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 IZUMO1Q8IYV9 350 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 FAM98AQ8NCA5 519 aaKnown RBP4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 CCDC150Q8NCX0 1101 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 TMEM171Q8WVE6 324 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 GLG1Q92896 1179 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 RFKQ969G6 155 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 MYH16Q9H6N6 1097 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 GBA2Q9HCG7 927 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 DKK3Q9UBP4 350 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 ZNHIT2Q9UHR6 403 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 DAAM1Q9Y4D1 1078 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 SNX14Q9Y5W7 946 aa4.39□□□□□ -1.71
TRAPPC13-204ENST00000438419 A1L4Q6 167 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 ZAR1LA6NP61 321 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 GCOM1H8Y6P7 765 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 TTLL1O95922 423 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 ERBB2P04626 1255 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 NR2F6P10588 404 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 HARSP12081 509 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 ALDH9A1P49189 494 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 MTHFSP49914 203 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 CLCN2P51788 898 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 COPAP53621 1224 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 ITGA8P53708 1063 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 TREML2Q5T2D2 321 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 EXOC8Q8IYI6 725 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 TXLNBQ8N3L3 684 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 SOCS4Q8WXH5 440 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 ZG16BQ96DA0 208 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 LRRC46Q96FV0 321 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 ARFGAP3Q9NP61 516 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 CEP83Q9Y592 693 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 PLEKHD1A6NEE1 506 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 NUDT3O95989 172 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 IL6RP08887 468 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 PCSK6P29122 969 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 LIPAP38571 399 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 TPTEP56180 551 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 TIAL1Q01085 375 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 HNRNPA0Q13151 305 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 STK3Q13188 491 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 SLC35G1Q2M3R5 365 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 C10orf62Q5T681 223 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 RRAGBQ5VZM2 374 aa4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-204ENST00000438419 XRRA1Q6P2D8 792 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms