RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 KLHL38Q2WGJ6 581 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 RFWD3Q6PCD5 774 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 SLC25A41Q8N5S1 370 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 TTC1Q99614 292 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 CCDC134Q9H6E4 229 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 ASNSD1Q9NWL6 643 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 MAP3K20Q9NYL2 800 aaKnown RBP13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 BTBD7Q9P203 1132 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 HES2Q9Y543 173 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 CLUHO75153 1309 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 PMM2O15305 246 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 HMGCRP04035 888 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 EFNA5P52803 228 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 TCEAL1Q15170 157 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 PDK4Q16654 411 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 XRRA1Q6P2D8 792 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 CES3Q6UWW8 571 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 FAM13CQ8NE31 585 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 AGAP3Q96P47 875 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 TMEM120AQ9BXJ8 343 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 RABGEF1Q9UJ41 708 aa13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 MYO18AQ92614 2054 aaKnown RBP13.22□□□□□ -0.29
PPP4R1-202ENST00000400555 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 H3BRJ5 948 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 FARP2O94887 1054 aaPredicted RBP13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 ARIH2O95376 493 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 GCAP28676 217 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 NDST1P52848 882 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 ATXN1P54253 815 aaKnown RBP13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 C16orf46Q6P387 395 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 PRPF39Q86UA1 669 aaKnown RBP13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 SHOC2Q9UQ13 582 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 ABCG1P45844 678 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 MCL1Q07820 350 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 CCDC124Q96CT7 223 aaKnown RBP13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 PCYT2Q99447 389 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 ACSS2Q9NR19 701 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 ARL8BQ9NVJ2 186 aa13.21□□□□□ -0.29
PPP4R1-202ENST00000400555 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 CHI3L2Q15782 390 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 IER5Q5VY09 327 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 PCGF5Q86SE9 256 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 NUDCD3Q8IVD9 361 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 NDUFAF2Q8N183 169 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 SERAC1Q96JX3 654 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 TRIM6Q9C030 488 aaPredicted RBP13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 YY1AP1Q9H869 796 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 CYP4F11Q9HBI6 524 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 TXNDC16Q9P2K2 825 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 SLC17A6Q9P2U8 582 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 LGALS13Q9UHV8 139 aa13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.3
PPP4R1-202ENST00000400555 B2RBV5 119 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 GPR25O00155 361 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 PDE1BQ01064 536 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 RCN1Q15293 331 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 EML3Q32P44 896 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 MPZL3Q6UWV2 235 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 MAP7D3Q8IWC1 876 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 HACE1Q8IYU2 909 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 ARHGEF3Q9NR81 526 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 HESX1Q9UBX0 185 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 MSCO60682 206 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 NPTXRO95502 500 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 ZNF286BP0CG31 522 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 DESP17661 470 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 SDC4P31431 198 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 NUMBP49757 651 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 EPHB1P54762 984 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 OASLQ15646 514 aaKnown RBP13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 RNF43Q68DV7 783 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 RIBC1Q8N443 379 aaPredicted RBP13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 DEPDC1BQ8WUY9 529 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 ELOVL4Q9GZR5 314 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 KLK14Q9P0G3 267 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 TSPAN16Q9UKR8 245 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 A6NJR5 290 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 HCRTO43612 131 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 GSCP56915 257 aaPredicted RBP13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 GOLGA7BQ2TAP0 167 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 ISLR2Q6UXK2 745 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 UNC5BQ8IZJ1 945 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 NDRG1Q92597 394 aaKnown RBP13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 CDT1Q9H211 546 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
PPP4R1-202ENST00000400555 SOWAHBA6NEL2 793 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 SIGLEC16A6NMB1 481 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 C19orf81C9J6K1 198 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 CREB3O43889 395 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 ITGAVP06756 1048 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms