RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 PRKAA1Q13131 559 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 ARPINQ7Z6K5 226 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 CENPLQ8N0S6 344 aaPredicted RBP9.91□□□□□ -0.82
SNX1-202ENST00000380285 ZNF280CQ8ND82 737 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 CCDC28BQ9BUN5 200 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 CPVLQ9H3G5 476 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 HMG20AQ9NP66 347 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 CAPN6Q9Y6Q1 641 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 HEATR9A2RTY3 570 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 TCN1P20061 433 aaPredicted RBP9.91□□□□□ -0.82
SNX1-202ENST00000380285 NAA20P61599 178 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 DCAF4L1Q3SXM0 396 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 DALRD3Q5D0E6 543 aaKnown RBP9.91□□□□□ -0.82
SNX1-202ENST00000380285 RFWD2Q8NHY2 731 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 TRPC4APQ8TEL6 797 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 C9orf16Q9BUW7 83 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 LATS2Q9NRM7 1088 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 MROH7Q68CQ1 1323 aa9.91□□□□□ -0.82
SNX1-202ENST00000380285 LOC100653049A0A140TA62 436 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 KRT34O76011 436 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 PDE9AO76083 593 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 TALDO1P37837 337 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 HHIPL2Q6UWX4 724 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 HDDC2Q7Z4H3 204 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 PHACTR1Q9C0D0 580 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 NRDE2Q9H7Z3 1164 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 RPS6KL1Q9Y6S9 549 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 CASZ1Q86V15 1759 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 MAP2K7O14733 419 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 HK2P52789 917 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 TBL3Q12788 808 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 MAD2L1Q13257 205 aaPredicted RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 TAB1Q15750 504 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 INAQ16352 499 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 HIST2H2ACQ16777 129 aaPredicted RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 PDPK2PQ6A1A2 396 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 HIST2H2AA3Q6FI13 130 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 PTRHD1Q6GMV3 140 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 TTC27Q6P3X3 843 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 KRT73Q86Y46 540 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 ZNF507Q8TCN5 953 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 SLC10A4Q96EP9 437 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 TEX13BQ9BXU2 312 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 UTP6Q9NYH9 597 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 HOXB6P17509 224 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 C1QBPQ07021 282 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 SF3B3Q15393 1217 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 PREPLQ4J6C6 727 aaPredicted RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 CYP4Z1Q86W10 505 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 MREGQ8N565 214 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 LSM7Q9UK45 103 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 SNX13Q9Y5W8 968 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 SPATA31A3Q5VYP0 1347 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 AHCYL1O43865 530 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 SERPINE1P05121 402 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 SKIV2L2P42285 1042 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 NR2C2P49116 596 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 DCTN2Q13561 401 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 KYAT3Q6YP21 454 aaKnown RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 C19orf18Q8NEA5 215 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 TMEM79Q9BSE2 394 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 ZCCHC18P0CG32 403 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 MYL4P12829 197 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 FBXW4P57775 412 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 KIZQ2M2Z5 673 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 SLC45A4Q5BKX6 768 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 SNX30Q5VWJ9 437 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 MTERF3Q96E29 417 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 APOPT1Q96IL0 206 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 KCNK4Q9NYG8 393 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNX1-202ENST00000380285 UBA2Q9UBT2 640 aaPredicted RBP9.9□□□□□ -0.82
SNX1-202ENST00000380285 KLHL3Q9UH77 587 aa9.9□□□□□ -0.82
SNX1-202ENST00000380285 TRDMT1O14717 391 aaKnown RBP9.9□□□□□ -0.83
SNX1-202ENST00000380285 WBP4O75554 376 aaKnown RBP9.9□□□□□ -0.83
SNX1-202ENST00000380285 PROSCO94903 275 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 CYP11B1P15538 503 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 ITGA1P56199 1179 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 BTKQ06187 659 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 TBX2Q13207 712 aaPredicted RBP9.9□□□□□ -0.83
SNX1-202ENST00000380285 COBLL1Q53SF7 1204 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 B3GNT6Q6ZMB0 384 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 STKLD1Q8NE28 680 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 FBXO25Q8TCJ0 367 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 TRIM8Q9BZR9 551 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 POLG2Q9UHN1 485 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 TRMT6Q9UJA5 497 aaKnown RBP9.9□□□□□ -0.83
SNX1-202ENST00000380285 TMEM191CA6NGB0 347 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 PGK2P07205 417 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 CPA2P48052 419 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 ACOT2P49753 483 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 CNTN1Q12860 1018 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 SYTL2Q9HCH5 934 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 ETAA1Q9NY74 926 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 TMCC3Q9ULS5 477 aa9.9□□□□□ -0.83
SNX1-202ENST00000380285 PRG3Q9Y2Y8 225 aaPredicted RBP9.9□□□□□ -0.83
SNX1-202ENST00000380285 CENPXA8MT69 81 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 ZBTB39O15060 712 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 GRIK1P39086 918 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 MYL6P60660 151 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms