RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 FUKQ8N0W3 1084 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 RASGEF1CQ8N431 466 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 NIPA2Q8N8Q9 360 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 ACTRT1Q8TDG2 376 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 GOLGA1Q92805 767 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 HSFY1Q96LI6 401 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 MCEEQ96PE7 176 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 DUSP16Q9BY84 665 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 TJP2Q9UDY2 1190 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 TTC7AQ9ULT0 858 aaPredicted RBP12.69□□□□□ -0.38
USF1-203ENST00000368021 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 TIMM13Q9Y5L4 95 aaPredicted RBP12.69□□□□□ -0.38
USF1-203ENST00000368021 FNDC1Q4ZHG4 1894 aaPredicted RBP12.69□□□□□ -0.38
USF1-203ENST00000368021 E5RJQ4 531 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 PDE2AO00408 941 aaPredicted RBP12.69□□□□□ -0.38
USF1-203ENST00000368021 NPR3P17342 541 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 ACAT1P24752 427 aaKnown RBP12.69□□□□□ -0.38
USF1-203ENST00000368021 ADORA2BP29275 332 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 ACADSBP45954 432 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 OR1G1P47890 313 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 PEX5P50542 639 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 DNA2P51530 1060 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 PIGHQ14442 188 aaPredicted RBP12.69□□□□□ -0.38
USF1-203ENST00000368021 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 CLUL1Q15846 466 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 PTPROQ16827 1216 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 KIAA0319Q5VV43 1072 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 OVOS1Q6IE37 1185 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 HASPINQ8TF76 798 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 UBXN4Q92575 508 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 RTP3Q9BQQ7 232 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 TMEM175Q9BSA9 504 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 NRDE2Q9H7Z3 1164 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 CRTAC1Q9NQ79 661 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 DNAJB4Q9UDY4 337 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 PCDHA3Q9Y5H8 950 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 I3L4J1 428 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 XPO1O14980 1071 aaKnown RBP12.68□□□□□ -0.38
USF1-203ENST00000368021 SYN3O14994 580 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 ATP2C2O75185 946 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 DGKIO75912 1065 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 NEFHP12036 1026 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 TKTP29401 623 aaKnown RBP12.68□□□□□ -0.38
USF1-203ENST00000368021 SCNN1AP37088 669 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 HTRA4P83105 476 aaPredicted RBP12.68□□□□□ -0.38
USF1-203ENST00000368021 MAPRE1Q15691 268 aaKnown RBP12.68□□□□□ -0.38
USF1-203ENST00000368021 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 FAM171BQ6P995 826 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 PAQR9Q6ZVX9 377 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 THEM5Q8N1Q8 247 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 LRRC43Q8N309 656 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 ARNTL2Q8WYA1 636 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 ALG3Q92685 438 aa12.68□□□□□ -0.38
USF1-203ENST00000368021 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 F8W810 466 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 RFXAPO00287 272 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 PSTPIP1O43586 416 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 OAZ2O95190 189 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 ALDH2P05091 517 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 FAM200BP0CF97 657 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 RFC1P35251 1148 aaPredicted RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 ACTN2P35609 894 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 YWHAHQ04917 246 aaPredicted RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 BTG3Q14201 252 aaPredicted RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 ACAP1Q15027 740 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 INTS6LQ5JSJ4 861 aaKnown RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 DCAF12L1Q5VU92 463 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 FBXO38Q6PIJ6 1188 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 OLFML1Q6UWY5 402 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 C10orf67Q8IYJ2 551 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 SPATA4Q8NEY3 305 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 KRT35Q92764 455 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 PCED1BQ96HM7 432 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 COLEC11Q9BWP8 271 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 PLVAPQ9BX97 442 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 PRDM12Q9H4Q4 367 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 ADAM28Q9UKQ2 775 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
USF1-203ENST00000368021 MYBPHLA2RUH7 354 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 TBKBP1A7MCY6 615 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 GOLGA8SH3BPF8 625 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 PGRMC1O00264 195 aaKnown RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 NRP1O14786 923 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 CEP104O60308 925 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 TADA2AO75478 443 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 GJB6O95452 261 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 RGS7P49802 495 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 RWDD2BP57060 319 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 ZNF252P-AS1Q0IIN9 211 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 ERCC6LQ2NKX8 1250 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 FAM102AQ5T9C2 384 aaPredicted RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 LRRC38Q5VT99 294 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 CLEC20AQ6ZU45 233 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 FAM183BPQ6ZVS7 135 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 ARCQ7LC44 396 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms