RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	YAR023C	D6VPM8	179 aa		5.46	□□□□□ -1.54
TGA1	tA(UGC)A	ADH2	P00331	348 aa	Known RBP	5.46	□□□□□ -1.54
TGA1	tA(UGC)A	AIM29	P36154	155 aa		5.46	□□□□□ -1.54
TGA1	tA(UGC)A	RPC10	P40422	70 aa		5.46	□□□□□ -1.54
TGA1	tA(UGC)A	WIP1	Q2V2P8	89 aa		5.46	□□□□□ -1.54
TGA1	tA(UGC)A	CYT2	Q00873	224 aa		5.45	□□□□□ -1.54
TGA1	tA(UGC)A	MED7	Q08278	222 aa		5.45	□□□□□ -1.54
TGA1	tA(UGC)A	YPR014C	Q6B0W2	109 aa		5.45	□□□□□ -1.54
TGA1	tA(UGC)A	PCL2	P25693	308 aa		5.44	□□□□□ -1.54
TGA1	tA(UGC)A	YER085C	P40058	173 aa		5.44	□□□□□ -1.54
TGA1	tA(UGC)A	COA3	Q3E7B2	85 aa		5.44	□□□□□ -1.54
TGA1	tA(UGC)A	YOR008C-A	Q3E7B9	74 aa		5.44	□□□□□ -1.54
TGA1	tA(UGC)A	GSP1	P32835	219 aa	Known RBP	5.43	□□□□□ -1.54
TGA1	tA(UGC)A	GSP2	P32836	220 aa	Known RBP	5.43	□□□□□ -1.54
TGA1	tA(UGC)A	YAR029W	P39549	74 aa		5.43	□□□□□ -1.54
TGA1	tA(UGC)A	YAL064W	P39711	94 aa		5.43	□□□□□ -1.54
TGA1	tA(UGC)A	SEC72	P39742	193 aa	Known RBP	5.43	□□□□□ -1.54
TGA1	tA(UGC)A	GTT1	P40582	234 aa		5.43	□□□□□ -1.54
TGA1	tA(UGC)A	DFM1	Q12743	341 aa	Known RBP	5.43	□□□□□ -1.54
TGA1	tA(UGC)A	ENV10	Q99382	181 aa		5.43	□□□□□ -1.54
TGA1	tA(UGC)A	SMP1	P38128	452 aa		5.42	□□□□□ -1.54
TGA1	tA(UGC)A	YGL118C	P53132	145 aa		5.42	□□□□□ -1.54
TGA1	tA(UGC)A	ZEO1	Q08245	113 aa		5.42	□□□□□ -1.54
TGA1	tA(UGC)A	URM1	P40554	99 aa	Predicted RBP	5.41	□□□□□ -1.54
TGA1	tA(UGC)A	OST3	P48439	350 aa		5.41	□□□□□ -1.54
TGA1	tA(UGC)A	YDR042C	Q03205	200 aa		5.41	□□□□□ -1.54
TGA1	tA(UGC)A	YLR112W	Q12130	139 aa		5.41	□□□□□ -1.54
TGA1	tA(UGC)A	CIN5	P40917	295 aa		5.4	□□□□□ -1.54
TGA1	tA(UGC)A	YDR029W	Q12111	104 aa		5.4	□□□□□ -1.54
TGA1	tA(UGC)A	YMR175W-A	Q3E766	64 aa		5.4	□□□□□ -1.54
TGA1	tA(UGC)A	YCL021W-A	Q96VH3	125 aa		5.4	□□□□□ -1.54
TGA1	tA(UGC)A	HMRA2	P0CY13	119 aa		5.39	□□□□□ -1.55
TGA1	tA(UGC)A	YMR295C	Q03559	197 aa		5.39	□□□□□ -1.55
TGA1	tA(UGC)A	PKR1	Q03880	122 aa	Known RBP	5.39	□□□□□ -1.55
TGA1	tA(UGC)A	TPT1	Q12272	230 aa	Known RBP	5.39	□□□□□ -1.55
TGA1	tA(UGC)A	YAL065C	O13511	128 aa		5.38	□□□□□ -1.55
TGA1	tA(UGC)A	YLR307C-A	Q3E825	87 aa		5.37	□□□□□ -1.55
TGA1	tA(UGC)A	APS1	P35181	156 aa		5.36	□□□□□ -1.55
TGA1	tA(UGC)A	YER134C	P40081	178 aa		5.36	□□□□□ -1.55
TGA1	tA(UGC)A	ERV14	P53173	138 aa		5.36	□□□□□ -1.55
TGA1	tA(UGC)A	SNA2	P56508	79 aa		5.35	□□□□□ -1.55
TGA1	tA(UGC)A	RPL31A	P0C2H8	113 aa	Known RBP	5.34	□□□□□ -1.55
TGA1	tA(UGC)A	RPL27B	P0C2H7	136 aa	Known RBP	5.33	□□□□□ -1.56
TGA1	tA(UGC)A	ATP15	P21306	62 aa		5.33	□□□□□ -1.56
TGA1	tA(UGC)A	POP3	P53833	195 aa	Predicted RBP	5.33	□□□□□ -1.56
TGA1	tA(UGC)A	LCL1	Q02786	101 aa		5.33	□□□□□ -1.56
TGA1	tA(UGC)A	YDL241W	Q07738	123 aa		5.33	□□□□□ -1.56
TGA1	tA(UGC)A	YKL070W	P36087	169 aa		5.32	□□□□□ -1.56
TGA1	tA(UGC)A	COX14	P39103	70 aa		5.32	□□□□□ -1.56
TGA1	tA(UGC)A	VTC1	P40046	129 aa	RIP-Chip data	5.32	□□□□□ -1.56	not detected
TGA1	tA(UGC)A	ARL3	Q02804	198 aa		5.32	□□□□□ -1.56
TGA1	tA(UGC)A	YMR103C	Q04436	120 aa		5.32	□□□□□ -1.56
TGA1	tA(UGC)A	CMC2	Q3E7A4	109 aa		5.32	□□□□□ -1.56
TGA1	tA(UGC)A	PEX22	P39718	180 aa		5.31	□□□□□ -1.56
TGA1	tA(UGC)A	HTL1	Q9URQ5	78 aa		5.31	□□□□□ -1.56
TGA1	tA(UGC)A	YDL022C-A	P0C5L6	82 aa		5.3	□□□□□ -1.56
TGA1	tA(UGC)A	RPL32	P38061	130 aa	Known RBP	5.29	□□□□□ -1.56
TGA1	tA(UGC)A	FYV4	P38783	130 aa	Predicted RBP	5.29	□□□□□ -1.56
TGA1	tA(UGC)A	AIM11	P87275	137 aa		5.29	□□□□□ -1.56
TGA1	tA(UGC)A	TOA2	P32774	122 aa		5.28	□□□□□ -1.56
TGA1	tA(UGC)A	SHU1	P38751	150 aa		5.27	□□□□□ -1.57
TGA1	tA(UGC)A	MMS2	P53152	137 aa		5.27	□□□□□ -1.57
TGA1	tA(UGC)A	ECM12	O13529	151 aa		5.26	□□□□□ -1.57
TGA1	tA(UGC)A	STF1	P01098	86 aa		5.26	□□□□□ -1.57
TGA1	tA(UGC)A	AQY2	P0CD90	149 aa		5.25	□□□□□ -1.57
TGA1	tA(UGC)A	PAU16	P35994	123 aa		5.25	□□□□□ -1.57
TGA1	tA(UGC)A	AIM19	P40502	157 aa		5.24	□□□□□ -1.57
TGA1	tA(UGC)A	YFL067W	P43537	175 aa		5.24	□□□□□ -1.57
TGA1	tA(UGC)A	YML108W	Q03759	105 aa		5.24	□□□□□ -1.57
TGA1	tA(UGC)A	MRPL33	P20084	86 aa		5.23	□□□□□ -1.57
TGA1	tA(UGC)A	MRPS12	P53732	153 aa		5.23	□□□□□ -1.57
TGA1	tA(UGC)A	CUE4	Q04201	117 aa	Predicted RBP	5.23	□□□□□ -1.57
TGA1	tA(UGC)A	PPT2	Q12036	173 aa		5.23	□□□□□ -1.57
TGA1	tA(UGC)A	YGL041C-B	Q3E750	60 aa		5.23	□□□□□ -1.57
TGA1	tA(UGC)A	RPL18A	P0CX49	186 aa	Known RBP	5.22	□□□□□ -1.57
TGA1	tA(UGC)A	RPL18B	P0CX50	186 aa	Known RBP	5.22	□□□□□ -1.57
TGA1	tA(UGC)A	PEX17	P40155	199 aa		5.22	□□□□□ -1.57
TGA1	tA(UGC)A	YKR041W	P36134	250 aa		5.21	□□□□□ -1.58
TGA1	tA(UGC)A	OXA1	P39952	402 aa		5.21	□□□□□ -1.58
TGA1	tA(UGC)A	YEL067C	P39978	195 aa		5.21	□□□□□ -1.58
TGA1	tA(UGC)A	CWP2	P43497	92 aa		5.21	□□□□□ -1.58
TGA1	tA(UGC)A	IGD1	P43598	195 aa		5.21	□□□□□ -1.58
TGA1	tA(UGC)A	YLR050C	Q12155	161 aa	Known RBP	5.21	□□□□□ -1.58
TGA1	tA(UGC)A	MVB12	P42939	101 aa		5.2	□□□□□ -1.58
TGA1	tA(UGC)A	MBF1	O14467	151 aa	Known RBP	5.19	□□□□□ -1.58
TGA1	tA(UGC)A	ADH1	P00330	348 aa	Known RBP	5.19	□□□□□ -1.58
TGA1	tA(UGC)A	QCR8	P08525	94 aa		5.19	□□□□□ -1.58
TGA1	tA(UGC)A	DDR48	P18899	430 aa	Known RBP	5.19	□□□□□ -1.58
TGA1	tA(UGC)A	YFL019C	P43576	117 aa		5.19	□□□□□ -1.58
TGA1	tA(UGC)A	SEN15	Q04675	128 aa		5.19	□□□□□ -1.58
TGA1	tA(UGC)A	CNL1	Q06333	122 aa		5.19	□□□□□ -1.58
TGA1	tA(UGC)A	YPL261C	Q08976	102 aa		5.19	□□□□□ -1.58
TGA1	tA(UGC)A	YBL039W-B	P0C268	59 aa		5.18	□□□□□ -1.58
TGA1	tA(UGC)A	SEC11	P15367	167 aa		5.18	□□□□□ -1.58
TGA1	tA(UGC)A	TIM11	P81449	96 aa	Predicted RBP	5.18	□□□□□ -1.58
TGA1	tA(UGC)A	SSS1	P35179	80 aa		5.17	□□□□□ -1.58
TGA1	tA(UGC)A	YGL193C	P53097	103 aa		5.17	□□□□□ -1.58
TGA1	tA(UGC)A	ATP16	Q12165	160 aa		5.17	□□□□□ -1.58
TGA1	tA(UGC)A	YBL112C	Q3E7Y4	105 aa		5.17	□□□□□ -1.58
TGA1	tA(UGC)A	YIL134C-A	Q45U18	67 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms