RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 UBR1Q8IWV7 1749 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 ZBBXA8MT70 800 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 DNAJC6O75061 913 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 BACE1P56817 501 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 FMO1Q01740 532 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 PTPN11Q06124 597 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-210ENST00000638567 BMT2Q1RMZ1 405 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 DENND5BQ6ZUT9 1274 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 MYLK2Q9H1R3 596 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 UBA6A0AVT1 1052 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-210ENST00000638567 CSDE1O75534 798 aaKnown RBP17.3■□□□□ 0.36
SCARB2-210ENST00000638567 KCNJ2P63252 427 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 MAPRE2Q15555 327 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 GLRA4Q5JXX5 417 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 MPZL3Q6UWV2 235 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 PRUNE1Q86TP1 453 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 EXOC3L1Q86VI1 746 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 WDR49Q8IV35 697 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 CDC26Q8NHZ8 85 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 SARS2Q9NP81 518 aaKnown RBP17.3■□□□□ 0.36
SCARB2-210ENST00000638567 TM9SF1O15321 606 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 PTGER2P43116 358 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 CACNB2Q08289 660 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-210ENST00000638567 UGP2Q16851 508 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 ATP13A4Q4VNC1 1196 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 TMTC4Q5T4D3 741 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 ZSWIM2Q8NEG5 633 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 ZNF384Q8TF68 577 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 VPS33BQ9H267 617 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 HACL1Q9UJ83 578 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 VDRP11473 427 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 SCUBE1Q8IWY4 988 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 SLC7A14Q8TBB6 771 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 TFB1MQ8WVM0 346 aaKnown RBP17.3■□□□□ 0.36
SCARB2-210ENST00000638567 NEUROG2Q9H2A3 272 aa17.3■□□□□ 0.36
SCARB2-210ENST00000638567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.3■□□□□ 0.36
SCARB2-210ENST00000638567 TYW5A2RUC4 315 aaKnown RBP17.29■□□□□ 0.36
SCARB2-210ENST00000638567 SNX2O60749 519 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 EEF1DP29692 281 aaKnown RBP17.29■□□□□ 0.36
SCARB2-210ENST00000638567 CHKAP35790 457 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 ZCWPW2Q504Y3 356 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 BTBD8Q5XKL5 378 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 C4orf22Q6V702 233 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 SLC9A9Q8IVB4 645 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 ZCCHC9Q8N567 271 aaKnown RBP17.29■□□□□ 0.36
SCARB2-210ENST00000638567 ZNF75CPQ92670 426 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-210ENST00000638567 SGF29Q96ES7 293 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 SAE1Q9UBE0 346 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-210ENST00000638567 GNAT1P11488 350 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 CATSPER1Q8NEC5 780 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 FAM84AQ96KN4 292 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 MRPL1Q9BYD6 325 aaKnown RBP17.29■□□□□ 0.36
SCARB2-210ENST00000638567 SP110Q9HB58 689 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 BNIP3LO60238 219 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 DPEP1P16444 411 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 SHROOM1Q2M3G4 852 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-210ENST00000638567 AGAP11Q8TF27 550 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 LRRC19Q9H756 370 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 DNAJC16Q9Y2G8 782 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 E2F6O75461 281 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 CYP1A2P05177 515 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 ETS1P14921 441 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 NCLNQ969V3 563 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 SPON2Q9BUD6 331 aa17.29■□□□□ 0.36
SCARB2-210ENST00000638567 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
SCARB2-210ENST00000638567 KBTBD13C9JR72 458 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 GLRA3O75311 464 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 CXCL8P10145 99 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 SERPINB3P29508 390 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 MTFR1Q15390 333 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 NIPA1Q7RTP0 329 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 GIPC2Q8TF65 315 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 DPP3Q9NY33 737 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 DCDC2CA8MYV0 355 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 SHOX2O60902 331 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-210ENST00000638567 SEC24DO94855 1032 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-210ENST00000638567 GTF2BQ00403 316 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 EFHC1Q5JVL4 640 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 KIAA1841Q6NSI8 718 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 KATNAL2Q8IYT4 538 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 ART4Q93070 314 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 ARMCX1Q9P291 453 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 FCHO1O14526 889 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 GAS2O43903 313 aaKnown RBP17.28■□□□□ 0.36
SCARB2-210ENST00000638567 NPTXRO95502 500 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 GFAPP14136 432 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 GNL1P36915 607 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-210ENST00000638567 NUDT2P50583 147 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 RPL10AP62906 217 aaKnown RBP17.28■□□□□ 0.36
SCARB2-210ENST00000638567 PDK2Q15119 407 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 IFNEQ86WN2 208 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 FAM131BQ86XD5 332 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 PPHLN1Q8NEY8 458 aaKnown RBP17.28■□□□□ 0.36
SCARB2-210ENST00000638567 ZBTB18Q99592 522 aa17.28■□□□□ 0.36
SCARB2-210ENST00000638567 PIAS1O75925 651 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 SETSIPP0DME0 302 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 CDC25CP30307 473 aa17.27■□□□□ 0.36
SCARB2-210ENST00000638567 RPA3P35244 121 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms