RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ZEB1P37275 1124 aaPredicted RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 POU6F2P78424 691 aaPredicted RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 KLF10Q13118 480 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 FGL2Q14314 439 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 HABP2Q14520 560 aaPredicted RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 AMOTQ4VCS5 1084 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 ARHGAP29Q52LW3 1261 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 KHDC1LQ5JSQ8 128 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 OVCH2Q7RTZ1 564 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 C14orf80Q86SX3 495 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 DAAM2Q86T65 1068 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 VRK3Q8IV63 474 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 AMER2Q8N7J2 671 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 NSUN7Q8NE18 718 aaKnown RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 TTC8Q8TAM2 541 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 BRIX1Q8TDN6 353 aaKnown RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 FUBP1Q96AE4 644 aaKnown RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 MTFMTQ96DP5 389 aaKnown RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 LRIG1Q96JA1 1093 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 RSAD1Q9HA92 442 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 SARS2Q9NP81 518 aaKnown RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 C1orf112Q9NSG2 853 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 GOLGA6AQ9NYA3 693 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 CTTNBP2NLQ9P2B4 639 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 PCDHA6Q9UN73 950 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 AGAP1Q9UPQ3 857 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 MAP3K5Q99683 1374 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 UBR2Q8IWV8 1755 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 COL3A1P02461 1466 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 KIF13BQ9NQT8 1826 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 DLG5Q8TDM6 1919 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 A0A1W2PS29 197 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 PIPSLA2A3N6 862 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 ERVV-2B6SEH9 535 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 ERC2O15083 957 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 PARNO95453 639 aaKnown RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 CHEK2O96017 543 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 EGR2P11161 476 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 KCNA2P16389 499 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 KRT4P19013 534 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 TNNT2P45379 298 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 AGFG1P52594 562 aaKnown RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 VAV2P52735 878 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 ZNF135P52742 658 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 RAB1AP62820 205 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 EXOSC9Q06265 439 aaKnown RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 PIGFQ07326 219 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 SCAPQ12770 1279 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 FHL2Q14192 279 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 GFOD2Q3B7J2 385 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 ANO6Q4KMQ2 910 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 PLEKHO1Q53GL0 409 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 CRB2Q5IJ48 1285 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 EMC10Q5UCC4 262 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 Q6ZPA2 131 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 CLNKQ7Z7G1 428 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 GPR149Q86SP6 731 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 USP37Q86T82 979 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 WDR75Q8IWA0 830 aaKnown RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 PIGBQ92521 554 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 TRIB1Q96RU8 372 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 PCED1AQ9H1Q7 454 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 UNKLQ9H9P5 680 aaKnown RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 STAP2Q9UGK3 403 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 CPA4Q9UI42 421 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 ING1Q9UK53 422 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 CCNL1Q9UK58 526 aaPredicted RBP4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 NEU2Q9Y3R4 380 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 PALLDQ8WX93 1383 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 TJP1Q07157 1748 aa4.49□□□□□ -1.69
CKS1BP3-201ENST00000600888 PRAMEF33A0A0G2JMD5 474 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 CCDC195A0A1B0GUA6 201 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 TMEM191CA6NGB0 347 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 PRAMEF10O60809 474 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 SUN1O94901 812 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 SLPIP03973 132 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 GNAI2P04899 355 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 MTHFSP49914 203 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 SOX8P57073 446 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 TAP1Q03518 808 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 FPGSQ05932 587 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 DYRK1AQ13627 763 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 GEN1Q17RS7 908 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 ABHD17BQ5VST6 288 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 SP5Q6BEB4 398 aaPredicted RBP4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 LAIR1Q6GTX8 287 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 NPNTQ6UXI9 565 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 COLGALT2Q8IYK4 626 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 KIAA0319LQ8IZA0 1049 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 CELF5Q8N6W0 485 aaKnown RBP4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 ASB10Q8WXI3 467 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 NT5C1BQ96P26 610 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 PRRX2Q99811 253 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 SMOQ99835 787 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 B3GNT5Q9BYG0 378 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 SIK2Q9H0K1 926 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 TMEM60Q9H2L4 133 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 MRPS18AQ9NVS2 196 aaKnown RBP4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 SRRDQ9UH36 339 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms