RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PNPLA8Q9NP80 782 aa27.3■■□□□ 1.96
TRIM28-204ENST00000594806 SORCS3Q9UPU3 1222 aa27.3■■□□□ 1.96
TRIM28-204ENST00000594806 ADORA2BP29275 332 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 WEE1P30291 646 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 COPB1P53618 953 aaKnown RBP27.29■■□□□ 1.96
TRIM28-204ENST00000594806 CACNA2D1P54289 1103 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 MTMR3Q13615 1198 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 STILQ15468 1287 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 PTPN21Q16825 1174 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 KAT5Q92993 513 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 KCNK16Q96T55 309 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 SMOQ99835 787 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 DUSP16Q9BY84 665 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 VPS16Q9H269 839 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 TMEM30AQ9NV96 361 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 VCANP13611 3396 aa27.29■■□□□ 1.96
TRIM28-204ENST00000594806 DCXO43602 365 aa27.28■■□□□ 1.96
TRIM28-204ENST00000594806 NPR3P17342 541 aa27.28■■□□□ 1.96
TRIM28-204ENST00000594806 RFX1P22670 979 aa27.28■■□□□ 1.96
TRIM28-204ENST00000594806 SLC8A3P57103 927 aa27.28■■□□□ 1.96
TRIM28-204ENST00000594806 HTR4Q13639 388 aa27.28■■□□□ 1.96
TRIM28-204ENST00000594806 CLEC20AQ6ZU45 233 aa27.28■■□□□ 1.96
TRIM28-204ENST00000594806 MRPS31Q92665 395 aaKnown RBP27.28■■□□□ 1.96
TRIM28-204ENST00000594806 UBXN6Q9BZV1 441 aa27.28■■□□□ 1.96
TRIM28-204ENST00000594806 TASP1Q9H6P5 420 aa27.28■■□□□ 1.96
TRIM28-204ENST00000594806 GJA1P17302 382 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 ZNF132P52740 706 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 KCNMA1Q12791 1236 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 TDGQ13569 410 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 IQCB1Q15051 598 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 UBALD2Q8IYN6 164 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 ANKRD52Q8NB46 1076 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 RBBP8NLQ8NC74 664 aaPredicted RBP27.27■■□□□ 1.96
TRIM28-204ENST00000594806 ZMIZ2Q8NF64 920 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 OVCA2Q8WZ82 227 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 SMARCD2Q92925 531 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 E2F7Q96AV8 911 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 SLITRK1Q96PX8 696 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 FBXO44Q9H4M3 255 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 SLITRK6Q9H5Y7 841 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 TRPV4Q9HBA0 871 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 SIX2Q9NPC8 291 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 IL37Q9NZH6 218 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 MUTYHQ9UIF7 546 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 DAAM1Q9Y4D1 1078 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 OBSL1O75147 1896 aa27.27■■□□□ 1.96
TRIM28-204ENST00000594806 BDP1A6H8Y1 2624 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 PI4K2BG5E9Z4 385 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 TNFRSF10BO14763 440 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 ECI2O75521 394 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 CD19P15391 556 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 PFKLP17858 780 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 YWHAQP27348 245 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 MAP3K7CLP57077 242 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 TPM4P67936 248 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 GPR158Q5T848 1215 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 TMEM150AQ86TG1 271 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 PDZD8Q8NEN9 1154 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 ASB16Q96NS5 453 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 ZFP14Q9HCL3 533 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 PLCB1Q9NQ66 1216 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 HESX1Q9UBX0 185 aa27.26■■□□□ 1.95
TRIM28-204ENST00000594806 NCANO14594 1321 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 LGALS16A8MUM7 142 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 STKLD1Q8NE28 680 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 SHC3Q92529 594 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 ELSPBP1Q96BH3 223 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 TRPM5Q9NZQ8 1165 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 DNAJC12Q9UKB3 198 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 NUMBLQ9Y6R0 609 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 CUL9Q8IWT3 2517 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 PATJQ8NI35 1801 aa27.25■■□□□ 1.95
TRIM28-204ENST00000594806 ANAPC1Q9H1A4 1944 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 FAM92AA1XBS5 289 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 RNF225M0QZC1 329 aaPredicted RBP27.24■■□□□ 1.95
TRIM28-204ENST00000594806 NRG2O14511 850 aaPredicted RBP27.24■■□□□ 1.95
TRIM28-204ENST00000594806 BEST1O76090 585 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 ASGR2P07307 311 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 KRT5P13647 590 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 PDE6CP51160 858 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 SLC5A3P53794 718 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 BCAT1P54687 386 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 USP46P62068 366 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 CNGA2Q16280 664 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 FAM78AQ5JUQ0 283 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 KLHDC7AQ5VTJ3 777 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 DPY19L2P1Q6NXN4 242 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 PARM1Q6UWI2 310 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 MON1AQ86VX9 555 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 ZSCAN18Q8TBC5 510 aaPredicted RBP27.24■■□□□ 1.95
TRIM28-204ENST00000594806 FGF14Q92915 247 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 ZSWIM3Q96MP5 696 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 CBX8Q9HC52 389 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 TSPAN16Q9UKR8 245 aa27.24■■□□□ 1.95
TRIM28-204ENST00000594806 NUP210Q8TEM1 1887 aaPredicted RBP27.23■■□□□ 1.95
TRIM28-204ENST00000594806 O00370 1275 aa27.23■■□□□ 1.95
TRIM28-204ENST00000594806 CYP4F8P98187 520 aa27.23■■□□□ 1.95
TRIM28-204ENST00000594806 ARHGAP44Q17R89 818 aa27.23■■□□□ 1.95
TRIM28-204ENST00000594806 GJB7Q6PEY0 223 aa27.23■■□□□ 1.95
TRIM28-204ENST00000594806 POTEHQ6S545 545 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms