RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 FNTAP49354 379 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 HADHBP55084 474 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 BPIFB4P59827 614 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ZNF772Q68DY9 489 aaPredicted RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 MIS18BP1Q6P0N0 1132 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 MRPL14Q6P1L8 145 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 CROCCP2Q86T23 111 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ANKRD35Q8N283 1001 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 SLC7A3Q8WY07 619 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ACSF2Q96CM8 615 aaPredicted RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 HVCN1Q96D96 273 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 NSRP1Q9H0G5 558 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 ST6GALNAC4Q9H4F1 302 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 XPNPEP1Q9NQW7 623 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 HAUS2Q9NVX0 235 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 CTNNAL1Q9UBT7 734 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 SFMBT1Q9UHJ3 866 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ZNF148Q9UQR1 794 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 GREB1LQ9C091 1923 aaPredicted RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 MAPK13O15264 365 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 PEX10O60683 326 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 LDHAP00338 332 aaKnown RBP5.65□□□□□ -1.5
VAPA-203ENST00000577539 KRT10P13645 584 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 CD19P15391 556 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 DRD4P21917 467 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 MARK3P27448 753 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 OSTNP61366 133 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 ATP11AP98196 1134 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 PLAURQ03405 335 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 ACTN3Q08043 901 aaPredicted RBP5.65□□□□□ -1.5
VAPA-203ENST00000577539 EMC2Q15006 297 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 ZBTB41Q5SVQ8 909 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 ERMARDQ5T6L9 678 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 EMC10Q5UCC4 262 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 SCARA5Q6ZMJ2 495 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 PNMA8AQ86V59 439 aaPredicted RBP5.65□□□□□ -1.5
VAPA-203ENST00000577539 GRIN3AQ8TCU5 1115 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 TRPM4Q8TD43 1214 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 GRK7Q8WTQ7 553 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 MAIP1Q8WWC4 291 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 TLCD1Q96CP7 247 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 PGM2Q96G03 612 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 MFSD14AQ96MC6 490 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 OSMRQ99650 979 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 EPB41L4BQ9H329 900 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 FBXO40Q9UH90 709 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 HACL1Q9UJ83 578 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 R3HDM2Q9Y2K5 976 aaKnown RBP5.65□□□□□ -1.5
VAPA-203ENST00000577539 SIPA1L1O43166 1804 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 POC1B-GALNT4F8VUJ3 575 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 GFRA2O00451 464 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 EXTL3O43909 919 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 CPP00450 1065 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 CREB1P16220 341 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 RHOQP17081 205 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 BACE1P56817 501 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 AUHQ13825 339 aaKnown RBP5.65□□□□□ -1.5
VAPA-203ENST00000577539 DBN1Q16643 649 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 ATP13A4Q4VNC1 1196 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 XKR3Q5GH77 459 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 WDR78Q5VTH9 848 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 DCAF15Q66K64 600 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 NUGGCQ68CJ6 796 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 ENOSF1Q7L5Y1 443 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 SRRM1Q8IYB3 904 aaKnown RBP5.65□□□□□ -1.5
VAPA-203ENST00000577539 CD101Q93033 1021 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 PMEPA1Q969W9 287 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 SNF8Q96H20 258 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 SRPK1Q96SB4 655 aaKnown RBP5.65□□□□□ -1.5
VAPA-203ENST00000577539 CCDC77Q9BR77 488 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 OSBPL8Q9BZF1 889 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 INO80BQ9C086 356 aaPredicted RBP5.65□□□□□ -1.5
VAPA-203ENST00000577539 AS3MTQ9HBK9 375 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 COQ4Q9Y3A0 265 aa5.65□□□□□ -1.5
VAPA-203ENST00000577539 TMEM120BA0PK00 339 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 TCP11X1B4DZS4 312 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 H0YCG3 227 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 GOLGA8SH3BPF8 625 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 FSBPO95073 299 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 ZBTB7AO95365 584 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 KRT1P04264 644 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 SRGAP2CP0DJJ0 459 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 BRAFP15056 766 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 STX2P32856 288 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 MASP1P48740 699 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 GMPSP49915 693 aaPredicted RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 TAS2R40P59535 323 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 DYNLT1P63172 113 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 NOP14P78316 857 aaKnown RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 GCNT1Q02742 428 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 SIM2Q14190 667 aaPredicted RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 TMED2Q15363 201 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 C2orf27AQ580R0 203 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 TDRD10Q5VZ19 366 aaKnown RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 IZUMO3Q5VZ72 239 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 HIBCHQ6NVY1 386 aaPredicted RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 ARMC9Q7Z3E5 817 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 DEFB132Q7Z7B7 95 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 RHOT1Q8IXI2 618 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 SAMD3Q8N6K7 520 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 821.9 ms