RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CXXC1Q9P0U4 656 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 ANKFY1Q9P2R3 1169 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 BAIAP2L1Q9UHR4 511 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 GGT7Q9UJ14 662 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 GRID1Q9ULK0 1009 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF148Q9UQR1 794 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 NOD1Q9Y239 953 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 PPME1Q9Y570 386 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 USH1CQ9Y6N9 552 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CLUHO75153 1309 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 SIGLEC16A6NMB1 481 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 TK2O00142 265 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 TRAFD1O14545 582 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 OGTO15294 1046 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 SPAG7O75391 227 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 TOM1L1O75674 476 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 DXOO77932 396 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 ITGBL1O95965 494 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 ATF7P17544 494 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 PROZP22891 400 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 EDNRBP24530 442 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 BRD2P25440 801 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 NF2P35240 595 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 RPA3P35244 121 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 GJC1P36383 396 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 TNFSF9P41273 254 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 MSH2P43246 934 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 SSR1P43307 286 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 ASPAP45381 313 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 CCNG1P51959 295 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 EFNA5P52803 228 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 MYL6P60660 151 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 SP4Q02446 784 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 E2F5Q15329 346 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 SURF1Q15526 300 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC1A5Q15758 541 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 STXBP2Q15833 593 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 SGSM1Q2NKQ1 1148 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 ACCSLQ4AC99 568 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 MSS51Q4VC12 460 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 KAZNQ674X7 775 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 GPAT2Q6NUI2 795 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 BBS12Q6ZW61 710 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 ARFGAP1Q8N6T3 406 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 MAB21L3Q8N8X9 362 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 NAT8LQ8N9F0 302 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF398Q8TD17 642 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 AGAP11Q8TF27 550 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 C10orf82Q8WW14 230 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 CPT1BQ92523 772 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 INPP5DQ92835 1189 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 UTP4Q969X6 686 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 STAMBPL1Q96FJ0 436 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 FAXDC2Q96IV6 333 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 SMC6Q96SB8 1091 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 ACO2Q99798 780 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 WDR83Q9BRX9 315 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 IMPG2Q9BZV3 1241 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 LHX5Q9H2C1 402 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 TXLNGQ9NUQ3 528 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 PSMC3IPQ9P2W1 217 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 HACL1Q9UJ83 578 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 CPSF3Q9UKF6 684 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 STRIP2Q9ULQ0 834 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 PHTF1Q9UMS5 762 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 CHKBQ9Y259 395 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 C15orf41Q9Y2V0 281 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 A0A0G2JMZ2 1700 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 LRRC37A2A6NM11 1700 aa5.45□□□□□ -1.54
ATPAF1-212ENST00000542495 IGKV6-21A0A0C4DH24 114 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 A0A1W2PPM1 405 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 LRRD1A4D1F6 860 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 GLTPD2A6NH11 291 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 POC1B-GALNT4F8VUJ3 575 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 H3BRB1 525 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 B4GALT4O60513 344 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ICMTO60725 284 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 LRCH4O75427 683 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM155BO75949 473 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 FARP2O94887 1054 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ZWINTO95229 277 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ANP32DO95626 131 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 KRT7P08729 469 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 HOXC6P09630 235 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 WEE2P0C1S8 567 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 T-ENOLP0DO92 83 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 FGFR1P11362 822 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 UBA1P22314 1058 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 VAMP1P23763 118 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 IL1R2P27930 398 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 RFC1P35251 1148 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 RPL22P35268 128 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 HMGCS2P54868 508 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC8A3P57103 927 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 GEMIN4P57678 1058 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 YWHAEP62258 255 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PDIA2Q13087 525 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms