RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 PARS2Q7L3T8 475 aaKnown RBP5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 KIAA0319LQ8IZA0 1049 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 ABRAQ8N0Z2 381 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 VGLL2Q8N8G2 317 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 OR56A3Q8NH54 315 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 BPIFB1Q8TDL5 484 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 OSCP1Q8WVF1 389 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 SOCS4Q8WXH5 440 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 FAM204AQ9H8W3 233 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 CPNE7Q9UBL6 633 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 DDX20Q9UHI6 824 aaKnown RBP5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 CCNL1Q9UK58 526 aaPredicted RBP5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 EID1Q9Y6B2 187 aa5.75□□□□□ -1.49
UBE2D3-218ENST00000505009 GOLGA6CA6NDK9 693 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 GOLGA6BA6NDN3 693 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 MYO1FO00160 1098 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 LATS1O95835 1130 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 GOLGA6DP0CG33 693 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 MPGP29372 298 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 SLC10A2Q12908 348 aaPredicted RBP5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 CNN3Q15417 329 aaKnown RBP5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 CYP1B1Q16678 543 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 PRAMEF17Q5VTA0 474 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 SLC9A4Q6AI14 798 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 APOA5Q6Q788 366 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 RP9Q8TA86 221 aaKnown RBP5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 CYP2W1Q8TAV3 490 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 JDP2Q8WYK2 163 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 ZNF778Q96MU6 729 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 LENG8Q96PV6 779 aaPredicted RBP5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 SH2D3AQ9BRG2 576 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 SLC29A3Q9BZD2 475 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 GBA2Q9HCG7 927 aaPredicted RBP5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 GOLGA6AQ9NYA3 693 aa5.74□□□□□ -1.49
UBE2D3-218ENST00000505009 CFAP69A5D8W1 941 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 NPSP0C0P6 89 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 CACNB3P54284 484 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 PRKAG1P54619 331 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 SUMO3P55854 103 aaPredicted RBP5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 TPTEP56180 551 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 SRSF7Q16629 238 aaKnown RBP eCLIP5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 TBC1D25Q3MII6 688 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 MTHFD1LQ6UB35 978 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 CAND1Q86VP6 1230 aaKnown RBP5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 MICU3Q86XE3 530 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 IZUMO1Q8IYV9 350 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 MAGEB6Q8N7X4 407 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 PPP2R3CQ969Q6 453 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 ZNF518BQ9C0D4 1074 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 TRMT13Q9NUP7 481 aaKnown RBP5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 FLRT1Q9NZU1 646 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 L1RE1Q9UN81 338 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 GABRQQ9UN88 632 aa5.73□□□□□ -1.49
UBE2D3-218ENST00000505009 ISM1B1AKI9 464 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 FRS3O43559 492 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 DLDP09622 509 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 CYP2D6P10635 497 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 FPR3P25089 353 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 ARHGAP29Q52LW3 1261 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 L1TD1Q5T7N2 865 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 KCTD20Q7Z5Y7 419 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 CHSY1Q86X52 802 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 C17orf80Q9BSJ5 609 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 THAP7Q9BT49 309 aaPredicted RBP5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 SACM1LQ9NTJ5 587 aa5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 G3BP2Q9UN86 482 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-218ENST00000505009 PRRT4C9JH25 899 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 AP4M1O00189 453 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 TJP3O95049 919 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 PRR35P0CG20 571 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 ZNF81P51508 661 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 TUBA4AP68366 448 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 E2F1Q01094 437 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 MLC1Q15049 377 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 C3orf38Q5JPI3 329 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 CEP78Q5JTW2 689 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 PAPD7Q5XG87 772 aaKnown RBP5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 FCRL6Q6DN72 434 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 KIRREL2Q6UWL6 708 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 SRGAP1Q7Z6B7 1085 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 DNAJB14Q8TBM8 379 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 PRR25Q96S07 402 aa5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 QTRT1Q9BXR0 403 aaKnown RBP5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 A1CFQ9NQ94 594 aaKnown RBP5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 ZNF70Q9UC06 446 aaPredicted RBP5.71□□□□□ -1.5
UBE2D3-218ENST00000505009 EXOC3O60645 756 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 PRKCBP05771 671 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 BRAFP15056 766 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 EPHB2P29323 1055 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 HOXA4Q00056 320 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 EZH2Q15910 746 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 INSCQ1MX18 579 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 SUPT20HL1Q3ZLR7 823 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 MTX3Q5HYI7 312 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 LRCH2Q5VUJ6 765 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 ZNF626Q68DY1 528 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 TRIM72Q6ZMU5 477 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 C1QL2Q7Z5L3 287 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 GLCCI1Q86VQ1 547 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 PNLDC1Q8NA58 520 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms