RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 EMC2Q15006 297 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 TCEAL1Q15170 157 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 ZSCAN26Q16670 478 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 NBPF12Q5TAG4 269 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 PLA2G4FQ68DD2 849 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 SWSAP1Q6NVH7 229 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 KCNV1Q6PIU1 500 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 TRIM72Q6ZMU5 477 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 CATSPERGQ6ZRH7 1159 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 CEP128Q6ZU80 1094 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 TRMT1LQ7Z2T5 733 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 NT5DC3Q86UY8 548 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 HOOK3Q86VS8 718 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 ZNF677Q86XU0 584 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 EFCAB13Q8IY85 973 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 GSPT2Q8IYD1 628 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 DAW1Q8N136 415 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 RASGEF1CQ8N431 466 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 METTL13Q8N6R0 699 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM161BQ8NDZ6 487 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 LNX1Q8TBB1 728 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 TCP11Q8WWU5 503 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 FAM168AQ92567 244 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 DCPSQ96C86 337 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 ZNF653Q96CK0 615 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 ACSF2Q96CM8 615 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 HES6Q96HZ4 224 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 RNPC3Q96LT9 517 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 DPH2Q9BQC3 489 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 CBWD1Q9BRT8 395 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 NTPCRQ9BSD7 190 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 RSRP1Q9BUV0 290 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM117Q9H0C3 514 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 STMN4Q9H169 189 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 ZCCHC17Q9NP64 241 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 RAB20Q9NX57 234 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 NFU1Q9UMS0 254 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 PACSIN2Q9UNF0 486 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 ST14Q9Y5Y6 855 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 COL4A5P29400 1685 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 DOCK1Q14185 1865 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 FAM221AA4D161 298 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GOLGA8IPA6NC78 632 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 LRRIQ4A6NIV6 560 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GOLGA8JA6NMD2 632 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 TMEM110-MUSTN1A8MSY1 372 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 H3BS24 57 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 PODXLO00592 558 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 NDC80O14777 642 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 RAD51CO43502 376 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CILPO75339 1184 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 RPS6KA5O75582 802 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 MTA2O94776 668 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SLC25A27O95847 323 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 BPNT1O95861 308 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CBX7O95931 251 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CCNE2O96020 404 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 PF4P02776 101 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GLI1P08151 1106 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 KCNA2P16389 499 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 TNNI1P19237 187 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ICAM3P32942 547 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CTNNA1P35221 906 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 HSPA9P38646 679 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SLC1A1P43005 524 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 NAMPTP43490 491 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 NSFP46459 744 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GUCY2FP51841 1108 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 EIF3BP55884 814 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 YWHAEP62258 255 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 DR1Q01658 176 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CDR2Q01850 454 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SP4Q02446 784 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GCNT1Q02742 428 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 PPP3CAQ08209 521 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 IFFO1Q0D2I5 559 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 PWP1Q13610 501 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 TFDP1Q14186 410 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 PSMD6Q15008 389 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SURF1Q15526 300 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 UGCGQ16739 394 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 MTERF2Q49AM1 385 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ODF2Q5BJF6 829 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SPDYCQ5MJ68 293 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 DPY19L2P1Q6NXN4 242 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 BNC2Q6ZN30 1099 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 MICALCLQ6ZW33 695 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ANO5Q75V66 913 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 THAP5Q7Z6K1 395 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CDH24Q86UP0 819 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SPATS2Q86XZ4 545 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ZBTB8OSQ8IWT0 167 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 CD302Q8IX05 232 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 FAM71AQ8IYT1 594 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GPC2Q8N158 579 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 C1orf131Q8NDD1 294 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 ZNF564Q8TBZ8 553 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 PARD3BQ8TEW8 1205 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 GRK7Q8WTQ7 553 aa6.26□□□□□ -1.41
ATPAF1-204ENST00000474020 SCFD2Q8WU76 684 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms