RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TMEM150AQ86TG1 271 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 SLC44A3Q8N4M1 653 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 AOPEPQ8N6M6 819 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 MRPS31Q92665 395 aaKnown RBP12.52□□□□□ -0.41
HSPG2-206ENST00000439717 EDAQ92838 391 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 SMARCD2Q92925 531 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 KAT5Q92993 513 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 E2F7Q96AV8 911 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ELSPBP1Q96BH3 223 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 KREMEN1Q96MU8 473 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 ASB16Q96NS5 453 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 KCNK16Q96T55 309 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 SMOQ99835 787 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 DUSP16Q9BY84 665 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 SLITRK6Q9H5Y7 841 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 TASP1Q9H6P5 420 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 PNPLA8Q9NP80 782 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 UBE2TQ9NPD8 197 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-206ENST00000439717 LIMA1Q9UHB6 759 aaKnown RBP12.52□□□□□ -0.41
HSPG2-206ENST00000439717 CNTN6Q9UQ52 1028 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 MUC3AQ02505 3323 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 DOCK6Q96HP0 2047 aa12.52□□□□□ -0.41
HSPG2-206ENST00000439717 TTC28Q96AY4 2481 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 DOCK8Q8NF50 2099 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 LRRC10BA6NIK2 292 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 PES1O00541 588 aaKnown RBP12.51□□□□□ -0.41
HSPG2-206ENST00000439717 TNFRSF10BO14763 440 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 BEST1O76090 585 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 NPR3P17342 541 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 PFKLP17858 780 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 CDK11BP21127 795 aaKnown RBP12.51□□□□□ -0.41
HSPG2-206ENST00000439717 YWHAQP27348 245 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 MAP3K7CLP57077 242 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 SLC8A3P57103 927 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 CYP4F8P98187 520 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 STILQ15468 1287 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 SGO2Q562F6 1265 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 FAM78AQ5JUQ0 283 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 GPR158Q5T848 1215 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 CLEC20AQ6ZU45 233 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 ANKRD52Q8NB46 1076 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 STKLD1Q8NE28 680 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 ZMIZ2Q8NF64 920 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 ZSCAN18Q8TBC5 510 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-206ENST00000439717 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 FGF14Q92915 247 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 SLITRK1Q96PX8 696 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 UBXN6Q9BZV1 441 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 ZFP14Q9HCL3 533 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 TAB2Q9NYJ8 693 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 DUSP12Q9UNI6 340 aa12.51□□□□□ -0.41
HSPG2-206ENST00000439717 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 TADA3O75528 432 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 CD19P15391 556 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 RFX1P22670 979 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 FCARP24071 287 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 PDE6CP51160 858 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 ZNF132P52740 706 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 COPB1P53618 953 aaKnown RBP12.5□□□□□ -0.41
HSPG2-206ENST00000439717 SLC5A3P53794 718 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 USP46P62068 366 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 KCNMA1Q12791 1236 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 NFKBIBQ15653 356 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 FKBP15Q5T1M5 1219 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 STXBP5Q5T5C0 1151 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 TANGO2Q6ICL3 276 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 MON1AQ86VX9 555 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 DHX40Q8IX18 779 aaKnown RBP12.5□□□□□ -0.41
HSPG2-206ENST00000439717 RBBP8NLQ8NC74 664 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-206ENST00000439717 PDZD8Q8NEN9 1154 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 RSAD2Q8WXG1 361 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 SLC46A2Q9BY10 475 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 VPS16Q9H269 839 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 HSD3B7Q9H2F3 369 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 FBXO44Q9H4M3 255 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 OBP2AQ9NY56 170 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 HESX1Q9UBX0 185 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 NCANO14594 1321 aa12.5□□□□□ -0.41
HSPG2-206ENST00000439717 ZNF840PA6NDX5 716 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 BECN2A8MW95 431 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 HHLA1C9JL84 531 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 RNF225M0QZC1 329 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-206ENST00000439717 O00370 1275 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 SRFP11831 508 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 KRT5P13647 590 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 BCAT1P54687 386 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 SIGLEC14Q08ET2 396 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 TAF10Q12962 218 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 CNGA2Q16280 664 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 GOLGA7BQ2TAP0 167 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 GJB7Q6PEY0 223 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 LCLAT1Q6UWP7 414 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 ARID3BQ8IVW6 561 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-206ENST00000439717 CMTM8Q8IZV2 173 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 MAB21L3Q8N8X9 362 aa12.49□□□□□ -0.41
HSPG2-206ENST00000439717 DEPDC1BQ8WUY9 529 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms