RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 NAALADL1Q9UQQ1 740 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 PPIL1Q9Y3C6 166 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 LRRK1Q38SD2 2015 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 LINC01553A4QN01 128 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 CST3P01034 146 aaPredicted RBP3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 IGLV3-19P01714 112 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 TEAD1P28347 426 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 ELF1P32519 619 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 KPNA1P52294 538 aaPredicted RBP3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 SLC25A11Q02978 314 aaKnown RBP3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 SIX1Q15475 284 aaPredicted RBP3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 BRMS1LQ5PSV4 323 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 FKBP15Q5T1M5 1219 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 MEI1Q5TIA1 1274 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 EMC10Q5UCC4 262 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 SLC9A4Q6AI14 798 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 C4orf22Q6V702 233 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 ZNF571Q7Z3V5 609 aaPredicted RBP3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 LUZP1Q86V48 1076 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 PDILTQ8N807 584 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 SPPL3Q8TCT6 385 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 CRTAC1Q9NQ79 661 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 PRKAG3Q9UGI9 489 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 ZNF510Q9Y2H8 683 aa3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 HBS1LQ9Y450 684 aaKnown RBP3.88□□□□□ -1.79
FNDC3A-202ENST00000398316 DOCK8Q8NF50 2099 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CCDC189A1A4V9 331 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 SMAPO00193 183 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 DDX3YO15523 660 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 TRAPPC3O43617 180 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 MOSPD3O75425 235 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 RTN3O95197 1032 aaPredicted RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 VTNP04004 478 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 FYNP06241 537 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 PCSK1P29120 753 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CD52P31358 61 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 AFMP43652 599 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 BCAT1P54687 386 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 UBASH3AP57075 661 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 GUCY2DQ02846 1103 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 BST2Q10589 180 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 XRCC4Q13426 336 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 NFE2Q16621 373 aaPredicted RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CEP135Q66GS9 1140 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 XYLT1Q86Y38 959 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 MCOLN2Q8IZK6 566 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 TEX26Q8N6G2 289 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 MNS1Q8NEH6 495 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 RUNDC3BQ96NL0 473 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 OLFM3Q96PB7 478 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 ZHX3Q9H4I2 956 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 PIDD1Q9HB75 910 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 OLA1Q9NTK5 396 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 USTQ9Y2C2 406 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 MRPL42Q9Y6G3 142 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 SCINQ9Y6U3 715 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 C2CD4BA6NLJ0 364 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 MIF4GDA9UHW6 222 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CASP1P29466 404 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CXCR3P49682 368 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 YARSP54577 528 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 ZNF252P-AS1Q0IIN9 211 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 SMC1AQ14683 1233 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 SKIDA1Q1XH10 827 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 ZC3H12AQ5D1E8 599 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 TEX35Q5T0J7 233 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 C1orf228Q6PIY5 440 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CHST9Q7L1S5 443 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 NOP9Q86U38 636 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 FUKQ8N0W3 1084 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 ZNF557Q8N988 423 aaPredicted RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 POMGNT1Q8WZA1 660 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 PSMG2Q969U7 264 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 MRPL38Q96DV4 380 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 ZBTB45Q96K62 511 aaPredicted RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 RPGRIP1Q96KN7 1286 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 TNIP3Q96KP6 325 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 OSMRQ99650 979 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 ATP13A1Q9HD20 1204 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 C2orf71A6NGG8 1288 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 TTC36A6NLP5 189 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 NPC1O15118 1278 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 IRAK2O43187 625 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CTIFO43310 598 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 NEBLO76041 1014 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 ERLIN2O94905 339 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 F11P03951 625 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 CXCL8P10145 99 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 ATF2P15336 505 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 HOXB8P17481 243 aaPredicted RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 SLC11A1P49279 550 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 RNASELQ05823 741 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 DPYSL2Q16555 572 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 HSF5Q4G112 596 aaPredicted RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 VARS2Q5ST30 1063 aaKnown RBP3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 LRRC71Q8N4P6 559 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 PLD4Q96BZ4 506 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 FAM212AQ96EL1 285 aa3.87□□□□□ -1.79
FNDC3A-202ENST00000398316 PCDHB18PQ96TA0 734 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms