RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 HORMAD1Q86X24 394 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 FBXO36Q8NEA4 188 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 VMP1Q96GC9 406 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 RERGLQ9H628 205 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 GJB6O95452 261 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 CYP11B1P15538 503 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 TPH1P17752 444 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 SP100P23497 879 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-203ENST00000375604 CNGA3Q16281 694 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 RARS2Q5T160 578 aaKnown RBP17.8■□□□□ 0.44
MCF2L-203ENST00000375604 NUDT5Q9UKK9 219 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 PTPRUQ92729 1446 aa17.8■□□□□ 0.44
MCF2L-203ENST00000375604 SSU72P8A0A1W2PR75 194 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 EARS2Q5JPH6 523 aaKnown RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 TEDDM1Q5T9Z0 273 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 SLFN11Q7Z7L1 901 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 ZNF555Q8NEP9 628 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 DNAJC7Q99615 494 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 OSGEPL1Q9H4B0 414 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 DDX43Q9NXZ2 648 aaKnown RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 DTNAQ9Y4J8 743 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 A0A087X0T9 212 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 STX7O15400 261 aaKnown RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 THP07101 528 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 FAM228BP0C875 321 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 SLURP2P0DP57 97 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 GHRP10912 638 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 ALDH6A1Q02252 535 aaKnown RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 OTOAQ7RTW8 1153 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 PTAR1Q7Z6K3 402 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 ARHGAP18Q8N392 663 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 TAS1R2Q8TE23 839 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 VPS28Q9UK41 221 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 PXDNLA1KZ92 1463 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 TRIM49D1C9J1S8 452 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 MAFGO15525 162 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 TARSP26639 723 aaKnown RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 GRIK4Q16099 956 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 TRAPPC11Q7Z392 1133 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 ERO1BQ86YB8 467 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 C10orf53Q8N6V4 93 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 STOML1Q9UBI4 398 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 HSPA1AP0DMV8 641 aaKnown RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 HSPA1BP0DMV9 641 aaKnown RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 NAMPTP43490 491 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 FAM180AQ6UWF9 173 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 KAZALD1Q96I82 304 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 ARL2BPQ9Y2Y0 163 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 FAM32AQ9Y421 112 aaKnown RBP17.79■□□□□ 0.44
MCF2L-203ENST00000375604 OGTO15294 1046 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 NBPF20Q3BBV1 942 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 PCNX4Q63HM2 1172 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 STAMBPL1Q96FJ0 436 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 YY1AP1Q9H869 796 aa17.79■□□□□ 0.44
MCF2L-203ENST00000375604 GUCA1CO95843 209 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 CCDC130P13994 396 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 RAP1GDS1P52306 607 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 WASHC5Q12768 1159 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 DNAJC3Q13217 504 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 INPP5AQ14642 412 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 ZNF614Q8N883 585 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 GTF3C2Q8WUA4 911 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-203ENST00000375604 SEC16BQ96JE7 1060 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 GEMIN4P57678 1058 aaKnown RBP17.78■□□□□ 0.44
MCF2L-203ENST00000375604 TRMT6Q9UJA5 497 aaKnown RBP17.78■□□□□ 0.44
MCF2L-203ENST00000375604 PNPLA4P41247 253 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 CNTN2Q02246 1040 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 POLD3Q15054 466 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-203ENST00000375604 CCT8L2Q96SF2 557 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 DDX4Q9NQI0 724 aaKnown RBP17.78■□□□□ 0.44
MCF2L-203ENST00000375604 IL17RBQ9NRM6 502 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 LZTS1Q9Y250 596 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 A0A1W2PQJ5 194 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 SNRPAP09012 282 aaKnown RBP17.78■□□□□ 0.44
MCF2L-203ENST00000375604 TKTL1P51854 596 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 SEMA4DQ92854 862 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 ZNF484Q5JVG2 852 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 NFKBIZQ9BYH8 718 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 RPS6KL1Q9Y6S9 549 aa17.78■□□□□ 0.44
MCF2L-203ENST00000375604 CYTH3O43739 400 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 INSRRP14616 1297 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 CDH8P55286 799 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 OTUB1Q96FW1 271 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-203ENST00000375604 SPATC1LQ9H0A9 340 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 C10orf88Q9H8K7 445 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 KLC4Q9NSK0 619 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 ABCA9Q8IUA7 1624 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 H7C4K7 107 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 TPST1O60507 370 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 ADORA2AP29274 412 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 GCLCP48506 637 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-203ENST00000375604 OTUD4Q01804 1114 aaKnown RBP17.77■□□□□ 0.44
MCF2L-203ENST00000375604 ARHGEF19Q8IW93 802 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 SYTL5Q8TDW5 730 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-203ENST00000375604 ANKS1AQ92625 1134 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 SPATA16Q9BXB7 569 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 AAASQ9NRG9 546 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 SUPT7LO94864 414 aa17.77■□□□□ 0.44
MCF2L-203ENST00000375604 PARNO95453 639 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms