RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 C12orf65Q9H3J6 166 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 TUT1Q9H6E5 874 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 SPON1Q9HCB6 807 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 HPS4Q9NQG7 708 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 PHTF1Q9UMS5 762 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 KAT6AQ92794 2004 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 PSMD10O75832 226 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 POMCP01189 267 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 UBTFL6P0CB48 400 aaPredicted RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 PYGBP11216 843 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 GFAPP14136 432 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 NDST1P52848 882 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 ITGB3BPQ13352 177 aaPredicted RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 MGAT5BQ3V5L5 792 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 SGO1Q5FBB7 561 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 C9orf131Q5VYM1 1079 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 CDKL3Q8IVW4 592 aaPredicted RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 POU5F2Q8N7G0 328 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 CEP70Q8NHQ1 597 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 ACTRT1Q8TDG2 376 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 ASAP3Q8TDY4 903 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 MORC4Q8TE76 937 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 ZBED2Q9BTP6 218 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 ERVK-5Q9HDB9 667 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 ACSS2Q9NR19 701 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 NDFIP2Q9NV92 336 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 DDX20Q9UHI6 824 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 IRF6O14896 467 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 PROSCO94903 275 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 TTC4O95801 387 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 FDX1P10109 184 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 RARGP13631 454 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 BGNP21810 368 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 ADCYAP1R1P41586 468 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 MAP3K7CLP57077 242 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 MAP3K21Q5TCX8 1036 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 CYB5D1Q6P9G0 228 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 IRF2BP2Q7Z5L9 587 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 MTDHQ86UE4 582 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 LRRC6Q86X45 466 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 ANKRD13AQ8IZ07 590 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 SPATA20Q8TB22 786 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 DNAJB3Q8WWF6 145 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 EGFL8Q99944 293 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 TRPC7Q9HCX4 862 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 USP18Q9UMW8 372 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 DCDC2CA8MYV0 355 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 CBX6O95503 412 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 JCHAINP01591 159 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 HOXA7P31268 230 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PTENP60484 403 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 RPL10AP62906 217 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 BEX3Q00994 111 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PTPN11Q06124 597 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 MMRN1Q13201 1228 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PDCD2Q16342 344 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PPP1R2P3Q6NXS1 205 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 KDM7AQ6ZMT4 941 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 ABRAQ8N0Z2 381 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 TRIML2Q8N7C3 387 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 C12orf29Q8N999 325 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PRCCQ92733 491 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 NCLNQ969V3 563 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 IDI2Q9BXS1 227 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 CHST12Q9NRB3 414 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PRMT7Q9NVM4 692 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 GAKO14976 1311 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 AMPD1P23109 780 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 ABCD1P33897 745 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 ELK3P41970 407 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 MAP7Q14244 749 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 TFDP3Q5H9I0 405 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 KLC3Q6P597 504 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 AENQ8WTP8 325 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PTPRN2Q92932 1015 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 ZNF512Q96ME7 567 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 GANQ9H2C0 597 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 MANSC1Q9H8J5 431 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 EPS15L1Q9UBC2 864 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 STOML1Q9UBI4 398 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 TSPAN16Q9UKR8 245 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 FAF1Q9UNN5 650 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 CEP290O15078 2479 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 TYW5A2RUC4 315 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 AP1G2O75843 785 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PRLRP16471 622 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 HOXA10P31260 410 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 THPOP40225 353 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 SCTRP47872 440 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 SNAPC2Q13487 334 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 CLEC16AQ2KHT3 1053 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 C6orf10Q5SRN2 563 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 AGBL2Q5U5Z8 902 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 C16orf46Q6P387 395 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 LRIG3Q6UXM1 1119 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 PRPF39Q86UA1 669 aaKnown RBP9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 KIAA0319LQ8IZA0 1049 aa9.47□□□□□ -0.89
SMARCA1-202ENST00000371122 ETNPPLQ8TBG4 499 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms