RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 DLK2Q6UY11 383 aa18.15■□□□□ 0.5
CHRNA5-201ENST00000299565 OLIG1Q8TAK6 271 aa18.15■□□□□ 0.5
CHRNA5-201ENST00000299565 NSL1Q96IY1 281 aa18.15■□□□□ 0.5
CHRNA5-201ENST00000299565 USP18Q9UMW8 372 aa18.15■□□□□ 0.5
CHRNA5-201ENST00000299565 MEI4A8MW99 385 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 CFLARO15519 480 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 ZWINTO95229 277 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 ASMTLO95671 621 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 BACE1P56817 501 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 KLC1Q07866 573 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 SH3PXD2AQ5TCZ1 1133 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 EFCAB3Q8N7B9 438 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 STK32AQ8WU08 396 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 NLRP7Q8WX94 980 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 DENND2DQ9H6A0 471 aaPredicted RBP18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 ARL8BQ9NVJ2 186 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 ASNSD1Q9NWL6 643 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 PDGFRBP09619 1106 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 FSTL1Q12841 308 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 WLSQ5T9L3 541 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 C16orf46Q6P387 395 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 SAMD3Q8N6K7 520 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 SLC26A7Q8TE54 656 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 ZNF570Q96NI8 536 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 KLC2Q9H0B6 622 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 PACSIN3Q9UKS6 424 aa18.14■□□□□ 0.49
CHRNA5-201ENST00000299565 CYB561D2O14569 222 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 PTPN20Q4JDL3 420 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 SNX30Q5VWJ9 437 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 RNF43Q68DV7 783 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 CRELD2Q6UXH1 353 aaPredicted RBP18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 DSTYKQ6XUX3 929 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 PRPF39Q86UA1 669 aaKnown RBP18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 ALYREFQ86V81 257 aaKnown RBP18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 TNRC6CQ9HCJ0 1690 aaKnown RBP18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 ADORA2BP29275 332 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 EML3Q32P44 896 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 GLRA4Q5JXX5 417 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 RHBDF2Q6PJF5 856 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 SNX9Q9Y5X1 595 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 LAMB1P07942 1786 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 KLRG2A4D1S0 409 aaPredicted RBP18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 PTPN4P29074 926 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 SDC4P31431 198 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 NAMPTP43490 491 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 AQP5P55064 265 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 RASA2Q15283 850 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 Q3C1V9 767 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 PLEKHA7Q6IQ23 1121 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 CES3Q6UWW8 571 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 RGS9BPQ6ZS82 235 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 DNAAF3Q8N9W5 541 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 ATP2A3Q93084 1043 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 CLPTM1LQ96KA5 538 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 ARHGEF3Q9NR81 526 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 SHOC2Q9UQ13 582 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 STARD13Q9Y3M8 1113 aa18.13■□□□□ 0.49
CHRNA5-201ENST00000299565 SPECC1L-ADORA2AF8WAN1 911 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 FCHO1O14526 889 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 CREB3O43889 395 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 KIF1CO43896 1103 aaKnown RBP18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 ABCG1P45844 678 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 IFRD2Q12894 506 aaPredicted RBP18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 CAPSQ13938 189 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 GRAMD1BQ3KR37 738 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 ATF7IP2Q5U623 682 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 RXFP2Q8WXD0 754 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 SPATA33Q96N06 139 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 INPP5FQ9Y2H2 1132 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 LCP1P13796 627 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 GMPSP49915 693 aaPredicted RBP18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 TFDP2Q14188 446 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 TMEM132BQ14DG7 1078 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 CPT1BQ92523 772 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 CPB2Q96IY4 423 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 STRA6Q9BX79 667 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 PRM3Q9NNZ6 103 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 OGTO15294 1046 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 P4HA1P13674 534 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 HMGB2P26583 209 aaKnown RBP18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 KHDC1Q4VXA5 237 aaKnown RBP18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 PPP4R1Q8TF05 950 aa18.12■□□□□ 0.49
CHRNA5-201ENST00000299565 KRT38O76015 456 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 CYP1A1P04798 512 aaPredicted RBP18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 OSBPP22059 807 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 SERPINB4P48594 390 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 THEMIS2Q5TEJ8 643 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 NIPA1Q7RTP0 329 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 CLNKQ7Z7G1 428 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 SCUBE3Q8IX30 993 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 C12orf29Q8N999 325 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 E2F7Q96AV8 911 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 SRPK1Q96SB4 655 aaKnown RBP18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 CPXM1Q96SM3 734 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 ASCC2Q9H1I8 757 aaPredicted RBP18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 ZNF408Q9H9D4 720 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 BATF3Q9NR55 127 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 ALOX15BO15296 676 aa18.11■□□□□ 0.49
CHRNA5-201ENST00000299565 TMEM63AO94886 807 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms