RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 FOPNLQ96NB1 174 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 MRPL1Q9BYD6 325 aaKnown RBP17.9■□□□□ 0.46
CDCP1-201ENST00000296129 CCDC90BQ9GZT6 254 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 COG4Q9H9E3 785 aa17.9■□□□□ 0.46
CDCP1-201ENST00000296129 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.9■□□□□ 0.46
CDCP1-201ENST00000296129 AVPR1AP37288 418 aa17.89■□□□□ 0.46
CDCP1-201ENST00000296129 PLA2G4AP47712 749 aa17.89■□□□□ 0.46
CDCP1-201ENST00000296129 SKIV2LQ15477 1246 aaKnown RBP17.89■□□□□ 0.46
CDCP1-201ENST00000296129 AP1ARQ63HQ0 302 aa17.89■□□□□ 0.46
CDCP1-201ENST00000296129 SNX31Q8N9S9 440 aa17.89■□□□□ 0.46
CDCP1-201ENST00000296129 RPRD1AQ96P16 312 aaPredicted RBP17.89■□□□□ 0.46
CDCP1-201ENST00000296129 LBHD1Q9BQE6 289 aaPredicted RBP17.89■□□□□ 0.46
CDCP1-201ENST00000296129 PYGLP06737 847 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 TGM2P21980 687 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 OAZ1P54368 228 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 TMEM121Q9BTD3 319 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 VPS33BQ9H267 617 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 TRIM45Q9H8W5 580 aaPredicted RBP17.89■□□□□ 0.45
CDCP1-201ENST00000296129 FAM198AQ9UFP1 575 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 RHOBTB1O94844 696 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 THP07101 528 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 ITGA11Q9UKX5 1188 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 USP20Q9Y2K6 914 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 NKRFO15226 690 aaKnown RBP eCLIP17.89■□□□□ 0.45
CDCP1-201ENST00000296129 GEMP55040 296 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 MIB1Q86YT6 1006 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 AGGF1Q8N302 714 aaeCLIP17.89■□□□□ 0.45
CDCP1-201ENST00000296129 TSC22D3Q99576 134 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 AP4E1Q9UPM8 1137 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 H7C4K7 107 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 LRG1P02750 347 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 TFRCP02786 760 aaKnown RBP17.89■□□□□ 0.45
CDCP1-201ENST00000296129 RABGAP1LQ5R372 815 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 ABRAQ8N0Z2 381 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 FBXO32Q969P5 355 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 P2RX7Q99572 595 aaKnown RBP17.89■□□□□ 0.45
CDCP1-201ENST00000296129 APOL5Q9BWW9 433 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 CYP3A43Q9HB55 503 aa17.89■□□□□ 0.45
CDCP1-201ENST00000296129 SERPIND1P05546 499 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 TGFB3P10600 412 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 KCNK18Q7Z418 384 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 CDH18Q13634 790 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 EXD1Q8NHP7 514 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 TRAPPC12Q8WVT3 735 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 FAM111AQ96PZ2 611 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 CASTOR2A6NHX0 329 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 CHRM3P20309 590 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 SLC11A2P49281 568 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 RXFP2Q8WXD0 754 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 LZICQ8WZA0 190 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 ABTB1Q969K4 478 aaPredicted RBP17.88■□□□□ 0.45
CDCP1-201ENST00000296129 SLC4A7Q9Y6M7 1214 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 AIM2O14862 343 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 SRP72O76094 671 aaKnown RBP17.88■□□□□ 0.45
CDCP1-201ENST00000296129 PRPF39Q86UA1 669 aaKnown RBP17.88■□□□□ 0.45
CDCP1-201ENST00000296129 FAM131BQ86XD5 332 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.88■□□□□ 0.45
CDCP1-201ENST00000296129 LRRIQ3A6PVS8 624 aaPredicted RBP17.88■□□□□ 0.45
CDCP1-201ENST00000296129 KLHL2O95198 593 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 HOXA10P31260 410 aaPredicted RBP17.88■□□□□ 0.45
CDCP1-201ENST00000296129 ZNF177Q13360 481 aaPredicted RBP17.88■□□□□ 0.45
CDCP1-201ENST00000296129 INPP5AQ14642 412 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 C16orf89Q6UX73 402 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 KDM7AQ6ZMT4 941 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 MTMR9Q96QG7 549 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 CNPY3Q9BT09 278 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 RPS6KL1Q9Y6S9 549 aa17.88■□□□□ 0.45
CDCP1-201ENST00000296129 GAKO14976 1311 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 BST2Q10589 180 aaKnown RBP17.87■□□□□ 0.45
CDCP1-201ENST00000296129 DNAJC3Q13217 504 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 MCOLN2Q8IZK6 566 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 KIF2BQ8N4N8 673 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 BLOC1S5Q8TDH9 187 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 CASZ1Q86V15 1759 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 F5H5T6 163 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 CNTN2Q02246 1040 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 C6orf10Q5SRN2 563 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 FBXW10Q5XX13 1052 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 C11orf63Q6NUN7 778 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 DNAJB3Q8WWF6 145 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 RUBCNLQ9H714 662 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 RGS4P49798 205 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 ATXN3P54252 364 aaPredicted RBP17.87■□□□□ 0.45
CDCP1-201ENST00000296129 TMED1Q13445 227 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 REPS2Q8NFH8 660 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 SPIRE2Q8WWL2 714 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 TEX12Q9BXU0 123 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 FUT8Q9BYC5 575 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 ARHGAP10A1A4S6 786 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 FAM107AO95990 144 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 LHX1P48742 406 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 NUMBP49757 651 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 CTXN3Q4LDR2 81 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 PPP2R3CQ969Q6 453 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 MTMR8Q96EF0 704 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 THTPAQ9BU02 230 aa17.87■□□□□ 0.45
CDCP1-201ENST00000296129 ASCC2Q9H1I8 757 aaPredicted RBP17.87■□□□□ 0.45
CDCP1-201ENST00000296129 RHBDL3P58872 404 aa17.86■□□□□ 0.45
CDCP1-201ENST00000296129 FBXO47Q5MNV8 452 aa17.86■□□□□ 0.45
CDCP1-201ENST00000296129 SCHIP1Q9P0W5 487 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms