RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 IFI35P80217 286 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 SGO1Q5FBB7 561 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 ILDR1Q86SU0 546 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 SPATA2LQ8IUW3 424 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 HPDLQ96IR7 371 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 DNAJC16Q9Y2G8 782 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 SNX13Q9Y5W8 968 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 ADGRA3Q8IWK6 1321 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 EPHB2P29323 1055 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 AVPR1AP37288 418 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 TMC5Q6UXY8 1006 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 B3GNT6Q6ZMB0 384 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 CCDC81Q6ZN84 652 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 LPCAT2Q7L5N7 544 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 SH3GL1Q99961 368 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 C17orf80Q9BSJ5 609 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 GPBP1L1Q9HC44 474 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 ANKEF1Q9NU02 776 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 NSMCE4AQ9NXX6 385 aa17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 TUBA8Q9NY65 449 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-201ENST00000284637 PRPF4O43172 522 aaKnown RBP eCLIP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 GZMAP12544 262 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 CHRNA5P30532 468 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 SARSP49591 514 aaKnown RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 STX5Q13190 355 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 PLEKHA7Q6IQ23 1121 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 HHIPL2Q6UWX4 724 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 TMC3Q7Z5M5 1100 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 SYBUQ9NX95 663 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 FAM32AQ9Y421 112 aaKnown RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 UNC13BO14795 1591 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 TPD52L2O43399 206 aaKnown RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 GLRA3O75311 464 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 HIST1H2AGP0C0S8 130 aaPredicted RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 HIST1H2ADP20671 130 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 RPS6KA3P51812 740 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 AASDHQ4L235 1098 aaPredicted RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 HORMAD1Q86X24 394 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 CREG2Q8IUH2 290 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 KCTD17Q8N5Z5 321 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 URGCPQ8TCY9 931 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 TFB1MQ8WVM0 346 aaKnown RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 HIST1H2AHQ96KK5 128 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 HIST1H2AJQ99878 128 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 BTBD10Q9BSF8 475 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 H2AFJQ9BTM1 129 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 PAIP1Q9H074 479 aaKnown RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 PKP3Q9Y446 797 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 ITGB3P05106 788 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 PLIN5Q00G26 463 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 XRCC4Q13426 336 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 DEPDC1Q5TB30 811 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 CALML6Q8TD86 181 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 SLC5A5Q92911 643 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 TAAR1Q96RJ0 339 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 SMARCAD1Q9H4L7 1026 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 A0A0A6YYK5 440 aaPredicted RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 ASB14A6NK59 587 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 RIPK2O43353 540 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 OCM2P0CE71 109 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 OCMP0CE72 109 aaPredicted RBP17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 NNMTP40261 264 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 GLRBP48167 497 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 RIPK1Q13546 671 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 TAS1R2Q8TE23 839 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 NDNQ99608 321 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 AGXT2Q9BYV1 514 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 IL18RAPO95256 599 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 KCTD21Q4G0X4 260 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 DENND1BQ6P3S1 775 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 KCNV1Q6PIU1 500 aa17.05■□□□□ 0.32
SH3RF1-201ENST00000284637 SNX3O60493 162 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 ENTPD3O75355 529 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 PMPCBO75439 489 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 THRAP10827 490 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 TNFRSF8P28908 595 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 BMPR2Q13873 1038 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 FUT11Q495W5 492 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 EFHC1Q5JVL4 640 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 NAPEPLDQ6IQ20 393 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 BRD8Q9H0E9 1235 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 MRGBPQ9NV56 204 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 FBXO28Q9NVF7 368 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 GPATCH2LQ9NWQ4 482 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 SLC30A1Q9Y6M5 507 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 A0A087X0B3 334 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 TRPC5OSA6NMA1 111 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 E9PBE3 544 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 NFIBO00712 420 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 KLHL41O60662 606 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 SUPT7LO94864 414 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 PYGLP06737 847 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 FAM58BPP0C7Q3 252 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 KCNJ2P63252 427 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 PPP4R4Q6NUP7 873 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 SPIRE2Q8WWL2 714 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 TMEM237Q96Q45 408 aa17.04■□□□□ 0.32
SH3RF1-201ENST00000284637 KCTD10Q9H3F6 313 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms