RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 STIP1P31948 543 aaKnown RBP12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 LPIN1Q14693 890 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 GSTA3Q16772 222 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 LRRC34Q8IZ02 419 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 CARNMT1Q8N4J0 409 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 FIG4Q92562 907 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 CATSPERBQ9H7T0 1116 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 RPS6KA5O75582 802 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 RBP3P10745 1247 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 TPP2P29144 1249 aaPredicted RBP12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 MAPKAPK2P49137 400 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 CCT3P49368 545 aaKnown RBP12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 PTK6Q13882 451 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 NEDD8Q15843 81 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 LEMD2Q8NC56 503 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 RGS18Q9NS28 235 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 BARHL2Q9NY43 387 aa12.89□□□□□ -0.35
ARFGEF1-201ENST00000262215 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 CNOT3O75175 753 aaKnown RBP12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 CLTBP09497 229 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 KCNT1Q5JUK3 1230 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 MMGT1Q8N4V1 131 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 MASTLQ96GX5 879 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 UBP1Q9NZI7 540 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 TEX28O15482 410 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 ATP6AP1LQ52LC2 224 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 EPS8L3Q8TE67 593 aaKnown RBP12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 UVRAGQ9P2Y5 699 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 CSDE1O75534 798 aaKnown RBP12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 STAU1O95793 577 aaKnown RBP12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 ITGA4P13612 1032 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 HALP42357 657 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 FRMD5Q7Z6J6 570 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 ATG4AQ8WYN0 398 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 ACOX2Q99424 681 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 PHTF1Q9UMS5 762 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 ERI2A8K979 691 aaKnown RBP12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 PDK1Q15118 436 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 CTNNAL1Q9UBT7 734 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 SMIM31A0A1B0GVY4 71 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 PAX7P23759 505 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 CCT8P50990 548 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 PSMD7P51665 324 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 REEP2Q9BRK0 252 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 ILKAPQ9H0C8 392 aaPredicted RBP12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 SH3BP4Q9P0V3 963 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 PAK5Q9P286 719 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 ARIH1Q9Y4X5 557 aaPredicted RBP12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 PTGES3LE9PB15 166 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 TNFRSF21O75509 655 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 RHAGQ02094 409 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 TAF8Q7Z7C8 310 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 TMEM79Q9BSE2 394 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 TINF2Q9BSI4 451 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 GPATCH2LQ9NWQ4 482 aa12.88□□□□□ -0.35
ARFGEF1-201ENST00000262215 GPD1P21695 349 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 DENND6AQ8IWF6 608 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 ADI1Q9BV57 179 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 POLE3Q9NRF9 147 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 RPS6KL1Q9Y6S9 549 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 MAGEA13PA6NCF6 341 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 CHURC1-FNTBB4DL54 471 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 UMPSP11172 480 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 SPPL2AQ8TCT8 520 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 RPRD1AQ96P16 312 aaPredicted RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 DUSP12Q9UNI6 340 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 COQ6Q9Y2Z9 468 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 AP4S1Q9Y587 144 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 MEI4A8MW99 385 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 FMO5P49326 533 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 PUDPQ08623 228 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 SLC18A3Q16572 532 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 PGBD2Q6P3X8 592 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 SLC13A5Q86YT5 568 aaPredicted RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 GUF1Q8N442 669 aaKnown RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 TFB1MQ8WVM0 346 aaKnown RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 DCP1AQ9NPI6 582 aaPredicted RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 TRPC5OSA6NMA1 111 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 FAM47E-STBD1D6RA91 191 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 M0QYT0 321 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 ADSLP30566 484 aaPredicted RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 GEMIN4P57678 1058 aaKnown RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 FAM228AQ86W67 206 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 SGSM3Q96HU1 749 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 PAIP1Q9H074 479 aaKnown RBP12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 IL1RAPL1Q9NZN1 696 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 NDOR1Q9UHB4 597 aa12.87□□□□□ -0.35
ARFGEF1-201ENST00000262215 VPS26AO75436 327 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms