RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 RGL1Q9NZL6 768 aa5.32□□□□□ -1.56
CCDC54-201ENST00000261058 ANKFY1Q9P2R3 1169 aa5.32□□□□□ -1.56
CCDC54-201ENST00000261058 MYRFQ9Y2G1 1151 aa5.32□□□□□ -1.56
CCDC54-201ENST00000261058 MAST3O60307 1309 aa5.32□□□□□ -1.56
CCDC54-201ENST00000261058 FER1L4A9Z1Z3 1794 aa5.32□□□□□ -1.56
CCDC54-201ENST00000261058 FAM234BA2RU67 622 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ZAR1LA6NP61 321 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 NDST3O95803 873 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 EGR1P18146 543 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SLC5A2P31639 672 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ZEB1P37275 1124 aaPredicted RBP5.31□□□□□ -1.56
CCDC54-201ENST00000261058 TECP42680 631 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 PDE6CP51160 858 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 MAPK10P53779 464 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ATXN1P54253 815 aaKnown RBP5.31□□□□□ -1.56
CCDC54-201ENST00000261058 BCAT1P54687 386 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 NXPH1P58417 271 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 TUBB8Q3ZCM7 444 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 CERCAMQ5T4B2 595 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 MANEALQ5VSG8 457 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 KCNV1Q6PIU1 500 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 CRIP3Q6Q6R5 217 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SLC15A3Q8IY34 581 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SYTL1Q8IYJ3 562 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 VPS37AQ8NEZ2 397 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 LINC00476Q8WZB0 136 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 C18orf8Q96DM3 657 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ZNF668Q96K58 619 aaPredicted RBP5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SNX27Q96L92 541 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 PSMD1Q99460 953 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 GPR20Q99678 358 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ACTRT3Q9BYD9 372 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 WDR11Q9BZH6 1224 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 TMEM8AQ9HCN3 771 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SERTAD3Q9UJW9 196 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 GOLGA6L3A6NEY3 463 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 OR2W5A6NFC9 320 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ADM5C9JUS6 153 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 F5H423 210 aaPredicted RBP5.31□□□□□ -1.56
CCDC54-201ENST00000261058 MATN3O15232 486 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 TCEA3O75764 348 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 PIAS2O75928 621 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ITGAMP11215 1152 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 MST1P26927 711 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ALDH9A1P49189 494 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SP2Q02086 613 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 CCNIQ14094 377 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 KCNAB1Q14722 419 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 PTPRRQ15256 657 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 RAB30Q15771 203 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SLC5A9Q2M3M2 681 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 GRAMD1BQ3KR37 738 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 MZT2AQ6P582 158 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 MYLK4Q86YV6 388 aaPredicted RBP5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ABRAQ8N0Z2 381 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 DNAJB14Q8TBM8 379 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SMCR8Q8TEV9 937 aaPredicted RBP5.31□□□□□ -1.56
CCDC54-201ENST00000261058 PGBD1Q96JS3 809 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 COQ10AQ96MF6 247 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 TPSD1Q9BZJ3 242 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 GBA2Q9HCG7 927 aaPredicted RBP5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ZBTB26Q9HCK0 441 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 SLC39A10Q9ULF5 831 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 COL4A3Q01955 1670 aa5.31□□□□□ -1.56
CCDC54-201ENST00000261058 ADGRA2Q96PE1 1338 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 GRID2IPA4D2P6 1211 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 VWC2LB2RUY7 222 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 PPM1DO15297 605 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 FFAR2O15552 330 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 SRGAP2O75044 1071 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 TYRP1P17643 537 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 TNFRSF1AP19438 455 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 MAKP20794 623 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 PDIA3P30101 505 aaKnown RBP5.3□□□□□ -1.56
CCDC54-201ENST00000261058 TRAPPC10P48553 1259 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 PRKAG1P54619 331 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 TAP1Q03518 808 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 GALNT1Q10472 559 aaPredicted RBP5.3□□□□□ -1.56
CCDC54-201ENST00000261058 CACHD1Q5VU97 1274 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 MRNIPQ6NTE8 343 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 CRTC1Q6UUV9 634 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 Q6ZPA2 131 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 B3GALNT2Q8NCR0 500 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 Q96MF0 132 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 ALG8Q9BVK2 526 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 MMRN2Q9H8L6 949 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 KLC4Q9NSK0 619 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 CEP83Q9Y592 693 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 SNX14Q9Y5W7 946 aa5.3□□□□□ -1.56
CCDC54-201ENST00000261058 PODXLO00592 558 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 YY2O15391 372 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 MPPED1O15442 326 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 TLR5O60602 858 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 RASAL1O95294 804 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 ARP10275 920 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 PCSK6P29122 969 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 ADORA2AP29274 412 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 UQCRC1P31930 480 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 ATICP31939 592 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 FOLR3P41439 243 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 634.5 ms