RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 DDX56Q9NY93 547 aaKnown RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 NR2E1Q9Y466 385 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 C2CD4BA6NLJ0 364 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 TMEM189-UBE2V1I3L0A0 370 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 I3L4J1 428 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 FSCN2O14926 492 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 PAPSS1O43252 624 aaPredicted RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 PHF2O75151 1096 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 LRCH4O75427 683 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 ZMYND10O75800 440 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 DDHD2O94830 711 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 CXCL10P02778 98 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 GPD1P21695 349 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 TNFRSF8P28908 595 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 SCNN1AP37088 669 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 CETN2P41208 172 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 GJA8P48165 433 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 CDR1P51861 262 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 RNASELQ05823 741 aaKnown RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 HADHQ16836 314 aaKnown RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 ZNF280BQ86YH2 543 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 COLGALT2Q8IYK4 626 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 PIWIL1Q96J94 861 aaKnown RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 FAM193BQ96PV7 902 aaPredicted RBP19.07■□□□□ 0.64
VIM-201ENST00000224237 ACBD6Q9BR61 282 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 MED10Q9BTT4 135 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.07■□□□□ 0.64
VIM-201ENST00000224237 OGFRQ9NZT2 677 aa19.07■□□□□ 0.64
VIM-201ENST00000224237 RNF8O76064 485 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 KRT7P08729 469 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 FAM200BP0CF97 657 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 TCF4P15884 667 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 CHRNA3P32297 505 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 SMC1AQ14683 1233 aaKnown RBP19.06■□□□□ 0.64
VIM-201ENST00000224237 PAQR9Q6ZVX9 377 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 DEFB128Q7Z7B8 93 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 SCUBE3Q8IX30 993 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 IFT20Q8IY31 132 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 RCOR2Q8IZ40 523 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 PAWRQ96IZ0 340 aaKnown RBP19.06■□□□□ 0.64
VIM-201ENST00000224237 CNPY3Q9BT09 278 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 ZNF446Q9NWS9 450 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 AMACRQ9UHK6 382 aa19.06■□□□□ 0.64
VIM-201ENST00000224237 CLDN5O00501 218 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 HOXA2O43364 376 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 GABBR2O75899 941 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 ITGB1P05556 798 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 GLI1P08151 1106 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 PDGFRAP16234 1089 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 DESP17661 470 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 TYMPP19971 482 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 SLC25A11Q02978 314 aaKnown RBP19.05■□□□□ 0.64
VIM-201ENST00000224237 CYP1B1Q16678 543 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 ODF2Q5BJF6 829 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 BEND6Q5SZJ8 279 aaPredicted RBP19.05■□□□□ 0.64
VIM-201ENST00000224237 ZFYVE27Q5T4F4 411 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 CCNI2Q6ZMN8 369 aaPredicted RBP19.05■□□□□ 0.64
VIM-201ENST00000224237 CLEC20AQ6ZU45 233 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 PIGZQ86VD9 579 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 PRELID2Q8N945 189 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 MYCBPAPQ8TBZ2 947 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 RXFP2Q8WXD0 754 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 PCED1BQ96HM7 432 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 GDF3Q9NR23 364 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 LRFN2Q9ULH4 789 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 MYBPHLA2RUH7 354 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 DPYSL4O14531 572 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 SEC31AO94979 1220 aaKnown RBP19.05■□□□□ 0.64
VIM-201ENST00000224237 LCP1P13796 627 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 PCK1P35558 622 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 FLT3P36888 993 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 GATMP50440 423 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 GUCY2DQ02846 1103 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 GLIPR1L2Q4G1C9 344 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 SLC26A9Q7LBE3 791 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 ARCQ7LC44 396 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 FAM35AQ86V20 835 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 ZDHHC14Q8IZN3 488 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 THEM5Q8N1Q8 247 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 C12orf50Q8NA57 414 aaPredicted RBP19.05■□□□□ 0.64
VIM-201ENST00000224237 ANKLE1Q8NAG6 615 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 KCTD13Q8WZ19 329 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 RUNDC3BQ96NL0 473 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 RTP3Q9BQQ7 232 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 B3GNT5Q9BYG0 378 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 KRT82Q9NSB4 513 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 PCDHB8Q9UN66 801 aa19.05■□□□□ 0.64
VIM-201ENST00000224237 TCRBV7S2A1N4TA0A589 114 aa19.04■□□□□ 0.64
VIM-201ENST00000224237 GRAP2O75791 330 aa19.04■□□□□ 0.64
VIM-201ENST00000224237 KRT1P04264 644 aa19.04■□□□□ 0.64
VIM-201ENST00000224237 OR1G1P47890 313 aa19.04■□□□□ 0.64
VIM-201ENST00000224237 COPS2P61201 443 aa19.04■□□□□ 0.64
VIM-201ENST00000224237 DHX34Q14147 1143 aaKnown RBP19.04■□□□□ 0.64
VIM-201ENST00000224237 SIX1Q15475 284 aaPredicted RBP19.04■□□□□ 0.64
VIM-201ENST00000224237 PKN2Q16513 984 aaKnown RBP19.04■□□□□ 0.64
VIM-201ENST00000224237 LRRC26Q2I0M4 334 aa19.04■□□□□ 0.64
VIM-201ENST00000224237 INTS6LQ5JSJ4 861 aaKnown RBP19.04■□□□□ 0.64
VIM-201ENST00000224237 OVOS1Q6IE37 1185 aa19.04■□□□□ 0.64
VIM-201ENST00000224237 ARFGAP1Q8N6T3 406 aa19.04■□□□□ 0.64
VIM-201ENST00000224237 MAGOHBQ96A72 148 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms