RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 SERTAD1Q9UHV2 236 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 FARP1Q9Y4F1 1045 aaPredicted RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 E9PMD0 336 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 PODXLO00592 558 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 MDM4O15151 490 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 AP1G1O43747 822 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 PGK1P00558 417 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 ADH1AP07327 375 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 IFI6P09912 130 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 SQSTM1Q13501 440 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 NR1D2Q14995 579 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 SHHQ15465 462 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 TDRD10Q5VZ19 366 aaKnown RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 FUT10Q6P4F1 479 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 ZNF365Q70YC5 407 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 FAM200AQ8TCP9 573 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 VOPP1Q96AW1 172 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 FAM212AQ96EL1 285 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 EPSTI1Q96J88 318 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 LRIG1Q96JA1 1093 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 TNIP3Q96KP6 325 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 NDNQ99608 321 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 TTPALQ9BTX7 342 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 DUSP16Q9BY84 665 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 CHRNA10Q9GZZ6 450 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 APEX2Q9UBZ4 518 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 PUF60Q9UHX1 559 aaKnown RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 EVLQ9UI08 416 aaPredicted RBP6.92□□□□□ -1.3
RTTN-215ENST00000639487 TMEM59LQ9UK28 342 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 STRIP2Q9ULQ0 834 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 SUFUQ9UMX1 484 aa6.92□□□□□ -1.3
RTTN-215ENST00000639487 EPB41P11171 864 aaKnown RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 MYCLP12524 364 aaPredicted RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 FERP16591 822 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 DNAJB2P25686 324 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 ZBTB16Q05516 673 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 MYO1EQ12965 1108 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 PAQR9Q6ZVX9 377 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 TMEM150AQ86TG1 271 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 RASGRP3Q8IV61 690 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 TEX26Q8N6G2 289 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 FBXL13Q8NEE6 735 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 ASIC4Q96FT7 647 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 CDHR5Q9HBB8 845 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 TELO2Q9Y4R8 837 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 KIAA1549Q9HCM3 1950 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 ANKRD63C9JTQ0 380 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 CETN3O15182 167 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 LUC7L3O95232 432 aaKnown RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 ECEL1O95672 775 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 CSH1P0DML2 217 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 CSH2P0DML3 217 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 MYBP10242 640 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 TXKP42681 527 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 PRCPP42785 496 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 COPAP53621 1224 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 EIF4HQ15056 248 aaKnown RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 PPP2R5EQ16537 467 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 DGKKQ5KSL6 1271 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 HS2ST1Q7LGA3 356 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 TTC30BQ8N4P2 665 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 RNF10Q8N5U6 811 aaKnown RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 SCARF2Q96GP6 870 aaPredicted RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 LENG8Q96PV6 779 aaPredicted RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 LBHD1Q9BQE6 289 aaPredicted RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 CLSTN3Q9BQT9 956 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 RGL1Q9NZL6 768 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 SSUH2Q9Y2M2 353 aa6.91□□□□□ -1.3
RTTN-215ENST00000639487 DDX49Q9Y6V7 483 aaKnown RBP6.91□□□□□ -1.3
RTTN-215ENST00000639487 STK10O94804 968 aaKnown RBP6.9□□□□□ -1.3
RTTN-215ENST00000639487 CDK4P11802 303 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 BMP1P13497 986 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 TRIM21P19474 475 aaKnown RBP6.9□□□□□ -1.3
RTTN-215ENST00000639487 ALDH1A3P47895 512 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 BEX3Q00994 111 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 PRAMEF19Q5SWL8 479 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 ZNF697Q5TEC3 545 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 KLHDC7AQ5VTJ3 777 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 MON1BQ7L1V2 547 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 MON1AQ86VX9 555 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 ETFBKMTQ8IXQ9 262 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 CCDC112Q8NEF3 446 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 BCL7CQ8WUZ0 217 aaPredicted RBP6.9□□□□□ -1.3
RTTN-215ENST00000639487 CD101Q93033 1021 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 SMARCD1Q96GM5 515 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 ZMAT2Q96NC0 199 aaKnown RBP6.9□□□□□ -1.3
RTTN-215ENST00000639487 PHF7Q9BWX1 381 aaPredicted RBP6.9□□□□□ -1.3
RTTN-215ENST00000639487 MED4Q9NPJ6 270 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 DPP3Q9NY33 737 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.9□□□□□ -1.3
RTTN-215ENST00000639487 DKK4Q9UBT3 224 aa6.9□□□□□ -1.3
RTTN-215ENST00000639487 VWA3AA6NCI4 1184 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 LACTBL1A8MY62 500 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 GOLGA6L22H0YM25 854 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 NRP1O14786 923 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CLDN3O15551 220 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 CREB3O43889 395 aa6.9□□□□□ -1.31
RTTN-215ENST00000639487 RNGTTO60942 597 aaKnown RBP6.9□□□□□ -1.31
RTTN-215ENST00000639487 RECQL4O94761 1208 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms