RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 UBE2E3Q969T4 207 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 SLC39A8Q9C0K1 460 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 RACGAP1Q9H0H5 632 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 CCDC134Q9H6E4 229 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 TMEM39AQ9NV64 488 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 GPN3Q9UHW5 284 aaPredicted RBP7.17□□□□□ -1.26
CHD2-208ENST00000626874 PSME2Q9UL46 239 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 GRID1Q9ULK0 1009 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 LTKP29376 864 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 SLC16A1P53985 500 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 KRT31Q15323 416 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 FAM133BQ5BKY9 247 aaKnown RBP7.17□□□□□ -1.26
CHD2-208ENST00000626874 TTC39BQ5VTQ0 682 aaPredicted RBP7.17□□□□□ -1.26
CHD2-208ENST00000626874 HDDC2Q7Z4H3 204 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 PHC3Q8NDX5 983 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 RNASE11Q8TAA1 199 aaKnown RBP7.17□□□□□ -1.26
CHD2-208ENST00000626874 RPRD1AQ96P16 312 aaPredicted RBP7.17□□□□□ -1.26
CHD2-208ENST00000626874 MTMR12Q9C0I1 747 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 ADNPQ9H2P0 1102 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 TMEM8AQ9HCN3 771 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.17□□□□□ -1.263e-6■■□□□ 11.6
CHD2-208ENST00000626874 NYAP2Q9P242 653 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 FBXL5Q9UKA1 691 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 A0A1W2PQC6 194 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 MTRF1O75570 445 aaKnown RBP7.17□□□□□ -1.26
CHD2-208ENST00000626874 THP07101 528 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 PIK3CGP48736 1102 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 CYB5D1Q6P9G0 228 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 KLHL35Q6PF15 583 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 SCAIQ8N9R8 606 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 EDC3Q96F86 508 aaKnown RBP7.17□□□□□ -1.26
CHD2-208ENST00000626874 MAP3K14Q99558 947 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 CCDC177Q9NQR7 707 aaPredicted RBP7.17□□□□□ -1.26
CHD2-208ENST00000626874 PCDHB2Q9Y5E7 798 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 CAMSAP1Q5T5Y3 1602 aa7.17□□□□□ -1.26
CHD2-208ENST00000626874 MYO1GB0I1T2 1018 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 STRNO43815 780 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 NFICP08651 508 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 GPD1P21695 349 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 TUFMP49411 452 aaKnown RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 PDX1P52945 283 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 INAVAQ3KP66 663 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 SKAP1Q86WV1 359 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 OTUD7AQ8TE49 926 aaPredicted RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 ACSF2Q96CM8 615 aaPredicted RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 PUS3Q9BZE2 481 aaKnown RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 NIF3L1Q9GZT8 377 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 STON1Q9Y6Q2 735 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 LDOC1O95751 146 aaPredicted RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 CYP21A2P08686 494 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 MSH3P20585 1137 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 AXLP30530 894 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 GTF2H1P32780 548 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 ZNF200P98182 395 aaPredicted RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 TAF2Q6P1X5 1199 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 FAM180AQ6UWF9 173 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 C11orf96Q7Z7L8 435 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 RNF25Q96BH1 459 aaPredicted RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 AGPAT1Q99943 283 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 PHF20Q9BVI0 1012 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 AP1M1Q9BXS5 423 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 TASP1Q9H6P5 420 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 VCPKMTQ9H867 229 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 NMRK2Q9NPI5 230 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 DCP1AQ9NPI6 582 aaPredicted RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 ZNF229Q9UJW7 825 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 AXIN2Q9Y2T1 843 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 PNPLA7Q6ZV29 1317 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 ADCY10Q96PN6 1610 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 QSOX1O00391 747 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 TIMM44O43615 452 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 MFAP3LO75121 409 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 CLK1P49759 484 aaKnown RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 CDC16Q13042 620 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 PCBP1Q15365 356 aaKnown RBP eCLIP7.16□□□□□ -1.26
CHD2-208ENST00000626874 GALNT18Q6P9A2 607 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 IYDQ6PHW0 289 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 LRRC8DQ7L1W4 858 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 SPACA7Q96KW9 195 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 TGS1Q96RS0 853 aaKnown RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 PRDM16Q9HAZ2 1276 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 TMCO1Q9UM00 188 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 SFI1A8K8P3 1242 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 H7C1W4 665 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 B3GAT3O94766 335 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 MYL4P12829 197 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 VCAM1P19320 739 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 CNTFP26441 200 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 PEX5LQ8IYB4 626 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 APOL5Q9BWW9 433 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 TAF1DQ9H5J8 278 aaPredicted RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 APEX2Q9UBZ4 518 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 RWDD3Q9Y3V2 267 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 ERVK-7P63135 1459 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 ARHGEF40Q8TER5 1519 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 TGFB3P10600 412 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 SSTR3P32745 418 aaPredicted RBP7.16□□□□□ -1.26
CHD2-208ENST00000626874 EPHX2P34913 555 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 PTGER2P43116 358 aa7.16□□□□□ -1.26
CHD2-208ENST00000626874 BCAT1P54687 386 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms