RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 RRP36Q96EU6 259 aaKnown RBP7.58□□□□□ -1.2
SCAMP1-206ENST00000618166 HIC2Q96JB3 615 aa7.58□□□□□ -1.2
SCAMP1-206ENST00000618166 ZNF577Q9BSK1 485 aa7.58□□□□□ -1.2
SCAMP1-206ENST00000618166 ZFP64Q9NPA5 681 aa7.58□□□□□ -1.2
SCAMP1-206ENST00000618166 COL4A3BPQ9Y5P4 624 aa7.58□□□□□ -1.2
SCAMP1-206ENST00000618166 NUP210Q8TEM1 1887 aaPredicted RBP7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 IGHV1OR15-9A0A0B4J2B8 117 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 B4GALT5O43286 388 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 CHMP2AO43633 222 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 SOAT2O75908 522 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 ERLIN2O94905 339 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 PLEKHA8P1O95397 391 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 ZNF883P0CG24 379 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 GABRR2P28476 465 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 SREBF1P36956 1147 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 CLCNKBP51801 687 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 DNAJC3Q13217 504 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 NKAPLQ5M9Q1 402 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 PLA2G4FQ68DD2 849 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 NOTUMQ6P988 496 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 SRGAP1Q7Z6B7 1085 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 ZCCHC9Q8N567 271 aaKnown RBP7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 IL17RCQ8NAC3 791 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 PRPF31Q8WWY3 499 aaKnown RBP7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 TMEM143Q96AN5 459 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 POM121Q96HA1 1249 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 SLC46A2Q9BY10 475 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 ANO3Q9BYT9 981 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 TRIM6Q9C030 488 aaPredicted RBP7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 GOLGA2P5Q9HBQ8 144 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 HELLSQ9NRZ9 838 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 CALCOCO1Q9P1Z2 691 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 TCEAL9Q9UHQ7 104 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 FBXL5Q9UKA1 691 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 TPCN1Q9ULQ1 816 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 ICE1Q9Y2F5 2266 aa7.57□□□□□ -1.2
SCAMP1-206ENST00000618166 PLXND1Q9Y4D7 1925 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 ESYT2A0FGR8 921 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 K7ENP7 123 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 KCNK3O14649 394 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 B3GAT3O94766 335 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 BMP4P12644 408 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 ARF4P18085 180 aaPredicted RBP7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 MATKP42679 507 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 USP11P51784 963 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 CDR1P51861 262 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 PCBP4P57723 403 aaKnown RBP7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 LAMTOR4Q0VGL1 99 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 MCMDC2Q4G0Z9 681 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 INO80CQ6PI98 192 aaPredicted RBP7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 TTC16Q8NEE8 873 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 USP13Q92995 863 aaPredicted RBP7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 GJA10Q969M2 543 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 ACAP3Q96P50 834 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 PGLYRP2Q96PD5 576 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 NIFKQ9BYG3 293 aaKnown RBP7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 ZDHHC5Q9C0B5 715 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 EPN3Q9H201 632 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 ECT2Q9H8V3 914 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 DISC1Q9NRI5 854 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 SEC63Q9UGP8 760 aaKnown RBP7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 ATXN7L1Q9ULK2 861 aaPredicted RBP7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 CYP8B1Q9UNU6 501 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 CACNA1DQ01668 2161 aa7.56□□□□□ -1.2
SCAMP1-206ENST00000618166 MYH9P35579 1960 aaKnown RBP7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 AKAP9Q99996 3911 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 ARID2Q68CP9 1835 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 TLN1Q9Y490 2541 aaKnown RBP7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 F8P00451 2351 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 CEP192Q8TEP8 1941 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 TBX3O15119 743 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 CER1O95813 267 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 THP07101 528 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 OR4Q2P0C623 313 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 FAM87AP0C7U9 286 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 GABRG2P18507 467 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 OPRD1P41143 372 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 IL9RQ01113 521 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 AMPD2Q01433 879 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 NMIQ13287 307 aaPredicted RBP7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 GLRA4Q5JXX5 417 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 SLC36A4Q6YBV0 504 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 NFXL1Q6ZNB6 911 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 NIPA1Q7RTP0 329 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 DHX40Q8IX18 779 aaKnown RBP7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 SRBD1Q8N5C6 995 aaKnown RBP7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 TTC9BQ8N6N2 239 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 RNF149Q8NC42 400 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 EPS8L1Q8TE68 723 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 KCNE4Q8WWG9 221 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 SPZ1Q9BXG8 430 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 FAM124BQ9H5Z6 455 aaPredicted RBP7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 TASP1Q9H6P5 420 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 GPAMQ9HCL2 828 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 AFF4Q9UHB7 1163 aaKnown RBP7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 PCDHGB2Q9Y5G2 931 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 WNT6Q9Y6F9 365 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 SLCO1B1Q9Y6L6 691 aa7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 SPTBN1Q01082 2364 aaKnown RBP7.55□□□□□ -1.2
SCAMP1-206ENST00000618166 CSMD2Q7Z408 3487 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms