RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 KLHL32Q96NJ5 620 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 MED15Q96RN5 788 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 ADAM2Q99965 735 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 LRFN3Q9BTN0 628 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 TLR10Q9BXR5 811 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 IMPG2Q9BZV3 1241 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 SCAND2PQ9GZW5 306 aaPredicted RBP4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 RLIMQ9NVW2 624 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 FEZ2Q9UHY8 353 aaPredicted RBP4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 MTO1Q9Y2Z2 717 aaKnown RBP4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 PCDHA1Q9Y5I3 950 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 NOX1Q9Y5S8 564 aa4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 CICQ96RK0 1608 aaPredicted RBP4.53□□□□□ -1.68
CKS1BP3-201ENST00000600888 IGSF1Q8N6C5 1336 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 ADAMTS7Q9UKP4 1686 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 A0A088AWK7 358 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 UNC119BA6NIH7 251 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 CDKL5O76039 1030 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 UBXN7O94888 489 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 MATN4O95460 622 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 ADH4P08319 380 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 HTR1BP28222 390 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 PHKA1P46020 1223 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 PIK3CGP48736 1102 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 CXADRP78310 365 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 GUCY1B3Q02153 619 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 EIF4A2Q14240 407 aaKnown RBP4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 PTPAQ15257 358 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 KCNV1Q6PIU1 500 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 PPP1R3BQ86XI6 285 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 ULK2Q8IYT8 1036 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 Q8NA96 180 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 SLC16A11Q8NCK7 471 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 PLBD2Q8NHP8 589 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 PPP1R35Q8TAP8 253 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 TNPO1Q92973 898 aaKnown RBP4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 SCAMP4Q969E2 229 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 NACC2Q96BF6 587 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 RUNDC1Q96C34 613 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 ALOXE3Q9BYJ1 711 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 SLAMF7Q9NQ25 335 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 TMEM74BQ9NUR3 256 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 VSX1Q9NZR4 365 aaPredicted RBP4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 RNF181Q9P0P0 153 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 CFAP97Q9P2B7 532 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 ANKFY1Q9P2R3 1169 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 GABBR1Q9UBS5 961 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 KCNE5Q9UJ90 142 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 ZDHHC8Q9ULC8 765 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 KNSTRNQ9Y448 316 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 COL5A3P25940 1745 aaPredicted RBP4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 KDRP35968 1356 aa4.52□□□□□ -1.69
CKS1BP3-201ENST00000600888 MYADML2A6NDP7 307 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 E9PLN8 166 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 CYR61O00622 381 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 B3GALT2O43825 422 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 ERN1O75460 977 aaKnown RBP4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 SPDEFO95238 335 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 FOSP01100 380 aaPredicted RBP4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 AHSGP02765 367 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 MYBP10242 640 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 PSMC1P62191 440 aaKnown RBP4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 ZNF844Q08AG5 666 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 TP53BP2Q13625 1128 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 KIF22Q14807 665 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 CYP2A13Q16696 494 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 ZNF627Q7L945 461 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 MORC1Q86VD1 984 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 FMNL3Q8IVF7 1028 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 CFAP52Q8N1V2 620 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 ZBTB34Q8NCN2 500 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 PDPRQ8NCN5 879 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 NEU4Q8WWR8 484 aaPredicted RBP4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 RNF31Q96EP0 1072 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 VKORC1Q9BQB6 163 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 POLR3GLQ9BT43 218 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 WDR11Q9BZH6 1224 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 TMPRSS5Q9H3S3 457 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 SERHL2Q9H4I8 314 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 ARMT1Q9H993 441 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 GPR35Q9HC97 309 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 GALNT9Q9HCQ5 603 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 STK32BQ9NY57 414 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 CDYLQ9Y232 598 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 C4BP0C0L5 1744 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 COL4A3Q01955 1670 aa4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 MYH14Q7Z406 1995 aaKnown RBP4.51□□□□□ -1.69
CKS1BP3-201ENST00000600888 SIPA1L3O60292 1781 aaPredicted RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 GOLGA6CA6NDK9 693 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 GOLGA6BA6NDN3 693 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 ZNF785A8K8V0 405 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 AKAP8O43823 692 aaKnown RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 TUSC2O75896 110 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 ZFPL1O95159 310 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 HSP90AB1P08238 724 aaKnown RBP4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 GOLGA6DP0CG33 693 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 RARBP10826 455 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 PHKG2P15735 406 aa4.5□□□□□ -1.69
CKS1BP3-201ENST00000600888 HDCP19113 662 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms