RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 RSAD2Q8WXG1 361 aa18.36■□□□□ 0.53
SHKBP1-212ENST00000596163 MRPS31Q92665 395 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-212ENST00000596163 SMARCD2Q92925 531 aa18.36■□□□□ 0.53
SHKBP1-212ENST00000596163 SMARCD1Q96GM5 515 aa18.36■□□□□ 0.53
SHKBP1-212ENST00000596163 ZNF518BQ9C0D4 1074 aa18.36■□□□□ 0.53
SHKBP1-212ENST00000596163 ZFP14Q9HCL3 533 aa18.36■□□□□ 0.53
SHKBP1-212ENST00000596163 CISHQ9NSE2 258 aa18.36■□□□□ 0.53
SHKBP1-212ENST00000596163 DUSP12Q9UNI6 340 aa18.36■□□□□ 0.53
SHKBP1-212ENST00000596163 F8VP50 259 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 CLDN5O00501 218 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 F11P03951 625 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 GPR158Q5T848 1215 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 FAM35AQ86V20 835 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 ZSCAN18Q8TBC5 510 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 ENOX1Q8TC92 643 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 FGF14Q92915 247 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 ELSPBP1Q96BH3 223 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 CYFIP2Q96F07 1278 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 TMEM176AQ96HP8 235 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 HEXIM2Q96MH2 286 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 ASB16Q96NS5 453 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 HNRNPABQ99729 332 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 TASP1Q9H6P5 420 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 TRPV4Q9HBA0 871 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 IL21Q9HBE4 155 aa18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 DMAP1Q9NPF5 467 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-212ENST00000596163 AP1G2O75843 785 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 RTN3O95197 1032 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 SRFP11831 508 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 WEE1P30291 646 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 PPP3CCP48454 512 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 ORC1Q13415 861 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 FAM78AQ5JUQ0 283 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 IRF2BP1Q8IU81 584 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 FUKQ8N0W3 1084 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 NUP93Q8N1F7 819 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 WHAMMQ8TF30 809 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 FAM81BQ96LP2 452 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 COMMD8Q9NX08 183 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 HMGXB4Q9UGU5 601 aa18.34■□□□□ 0.53
SHKBP1-212ENST00000596163 TMEM221A6NGB7 291 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 PRR33A8MZF0 331 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 M0R296 226 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 DPYSL4O14531 572 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 LETM1O95202 739 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 FAM200BP0CF97 657 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 CCDC130P13994 396 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 EEF1GP26641 437 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 MAN2A1Q16706 1144 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 ZNF394Q53GI3 561 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 TANGO2Q6ICL3 276 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 GBP6Q6ZN66 633 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 PAQR9Q6ZVX9 377 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 PPM1KQ8N3J5 372 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 C12orf29Q8N999 325 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 LMO3Q8TAP4 145 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 ZSWIM3Q96MP5 696 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 TWNKQ96RR1 684 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 KXD1Q9BQD3 176 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 INTS2Q9H0H0 1204 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 FAM49BQ9NUQ9 324 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 TRPM5Q9NZQ8 1165 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 FBXL21Q9UKT6 434 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 KIAA1257Q9ULG3 409 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 NFE2L3Q9Y4A8 694 aa18.33■□□□□ 0.52
SHKBP1-212ENST00000596163 C5orf42Q9H799 3197 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 GTPBP10A4D1E9 387 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 TPM2P07951 284 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 ADORA2BP29275 332 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 PDE6CP51160 858 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 SLC8A3P57103 927 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 CYP4F8P98187 520 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 PFKPQ01813 784 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 GCNT1Q02742 428 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 CAVIN1Q6NZI2 390 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 BMP8AQ7Z5Y6 402 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 MON1AQ86VX9 555 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 DEPDC1BQ8WUY9 529 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 JAKMIP2Q96AA8 810 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 SLITRK1Q96PX8 696 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 ARID3AQ99856 593 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 TUBGCP2Q9BSJ2 902 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 TTLL2Q9BWV7 592 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 SLC2A4RGQ9NR83 387 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 KRT82Q9NSB4 513 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 GCNT4Q9P109 453 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 TMEM63CQ9P1W3 806 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 WNT16Q9UBV4 365 aa18.32■□□□□ 0.52
SHKBP1-212ENST00000596163 KCNJ18B7U540 433 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 PFKLP17858 780 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 YWHAQP27348 245 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 AVPR1AP37288 418 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 RAD23BP54727 409 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 KCNJ12Q14500 433 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 VWA3BQ502W6 1294 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 ENOSF1Q7L5Y1 443 aa18.31■□□□□ 0.52
SHKBP1-212ENST00000596163 TMEM150AQ86TG1 271 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms