RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	GCLM	P48507	274 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	NOP14	P78316	857 aa	Known RBP	11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	LRRC63	Q05C16	580 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	PPP3CA	Q08209	521 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	FCHO2	Q0JRZ9	810 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	STIM1	Q13586	685 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	TPRG1	Q6ZUI0	275 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	YAF2	Q8IY57	180 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	ADSSL1	Q8N142	457 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	MRPS31	Q92665	395 aa	Known RBP	11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	ELMO3	Q96BJ8	720 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	EEF2KMT	Q96G04	330 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	SPATA17	Q96L03	361 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	FOXQ1	Q9C009	403 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	ZNF518B	Q9C0D4	1074 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	SDCBP2	Q9H190	292 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	IRF2BPL	Q9H1B7	796 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	MMRN2	Q9H8L6	949 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	TMEM8A	Q9HCN3	771 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	TRPV5	Q9NQA5	729 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	HEBP1	Q9NRV9	189 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	MAN1B1	Q9UKM7	699 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	F5	P12259	2224 aa		11.65	□□□□□ -0.54
PPP4R1-208	ENST00000578178	HELZ	P42694	1942 aa	Known RBP	11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	KANSL1L	A0AUZ9	987 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	TRIM49B	A6NDI0	452 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	SOBP	A7XYQ1	873 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178		F8VP50	259 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	ARNTL	O00327	626 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	ZNF263	O14978	683 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CHAD	O15335	359 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	STX10	O60499	249 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	AVPR1A	P37288	418 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	GRIK1	P39086	918 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	MXI1	P50539	228 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	PMS1	P54277	932 aa	Known RBP	11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CDH8	P55286	799 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	MCCD1	P59942	119 aa	Predicted RBP	11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	UBE2H	P62256	183 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	FKBP3	Q00688	224 aa	Known RBP	11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	KRT39	Q6A163	491 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	SPOPL	Q6IQ16	392 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CMTM8	Q8IZV2	173 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	DTWD2	Q8NBA8	298 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CCDC150	Q8NCX0	1101 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	TAS1R2	Q8TE23	839 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	TNIP3	Q96KP6	325 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	C8orf48	Q96LL4	319 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	SLC46A2	Q9BY10	475 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	BCO2	Q9BYV7	579 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	NIF3L1	Q9GZT8	377 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	KIF9	Q9HAQ2	790 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	LTB4R2	Q9NPC1	389 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	SIT1	Q9Y3P8	196 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	PATJ	Q8NI35	1801 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	PIEZO1	Q92508	2521 aa		11.64	□□□□□ -0.55
PPP4R1-208	ENST00000578178	MYH10	P35580	1976 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CLDN5	O00501	218 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	DCN	P07585	359 aa	Known RBP	11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CCNE1	P24864	410 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	INCA1	Q0VD86	236 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	UBXN2B	Q14CS0	331 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	ARHGAP29	Q52LW3	1261 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	TXNDC8	Q6A555	127 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	ANKRD40	Q6AI12	368 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	ZNF852	Q6ZMS4	543 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	DENND5B	Q6ZUT9	1274 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	FAM35A	Q86V20	835 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	MON1A	Q86VX9	555 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	UNC93A	Q86WB7	457 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CELF5	Q8N6W0	485 aa	Known RBP	11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	MAB21L3	Q8N8X9	362 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	BPIFB1	Q8TDL5	484 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	SMARCD1	Q96GM5	515 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	TTLL2	Q9BWV7	592 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	B3GNT5	Q9BYG0	378 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	OSBPL6	Q9BZF3	934 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	SMG9	Q9H0W8	520 aa	Known RBP	11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	APOBEC3G	Q9HC16	384 aa	Known RBP	11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	4e-10	■■■■■ 39.2
PPP4R1-208	ENST00000578178	EHD2	Q9NZN4	543 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	DLGAP2	Q9P1A6	1054 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	HMGXB4	Q9UGU5	601 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	PIAS3	Q9Y6X2	628 aa		11.63	□□□□□ -0.55
PPP4R1-208	ENST00000578178	MYO16	Q9Y6X6	1858 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	TRAV19	A0A0A6YYK7	116 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178		H0Y858	1186 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	MAN2B1	O00754	1011 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CD44	P16070	742 aa	Known RBP	11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	TRIM21	P19474	475 aa	Known RBP	11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	TARS	P26639	723 aa	Known RBP	11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	NDST1	P52848	882 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	CACNA2D1	P54289	1103 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	USP46	P62068	366 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	PLCB2	Q00722	1185 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	MORC3	Q14149	939 aa		11.62	□□□□□ -0.55
PPP4R1-208	ENST00000578178	ZNF268	Q14587	947 aa	Predicted RBP	11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms