RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 KIF1CO43896 1103 aaKnown RBP14.3□□□□□ -0.12
NDEL1-204ENST00000578172 LGR5O75473 907 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 ATP4AP20648 1035 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 GMPRP36959 345 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 RABGGTBP53611 331 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 CENPCQ03188 943 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 FAAP100Q0VG06 881 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 LAMTOR4Q0VGL1 99 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 ZC3H12AQ5D1E8 599 aaKnown RBP14.3□□□□□ -0.12
NDEL1-204ENST00000578172 ATF7IP2Q5U623 682 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 CCDC62Q6P9F0 684 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 ACOT1Q86TX2 421 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 CCDC125Q86Z20 511 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 RFWD2Q8NHY2 731 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 CGRRF1Q99675 332 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 STRA6Q9BX79 667 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 ATRNL1Q5VV63 1379 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 TRIM49D1C9J1S8 452 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 NPTXRO95502 500 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 LDHAP00338 332 aaKnown RBP14.3□□□□□ -0.12
NDEL1-204ENST00000578172 ESRRAP11474 423 aaPredicted RBP14.3□□□□□ -0.12
NDEL1-204ENST00000578172 MIPP30301 263 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 RPL22P35268 128 aaKnown RBP14.3□□□□□ -0.12
NDEL1-204ENST00000578172 KBTBD12Q3ZCT8 623 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 FAM160B1Q5W0V3 765 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 KDELC2Q7Z4H8 507 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 SAMD3Q8N6K7 520 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 RNF169Q8NCN4 708 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 PDGFCQ9NRA1 345 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 SLC17A6Q9P2U8 582 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 FIS1Q9Y3D6 152 aa14.3□□□□□ -0.12
NDEL1-204ENST00000578172 EME2A4GXA9 379 aaPredicted RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 TXNDC9O14530 226 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 COPEO14579 308 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 TXNP10599 105 aaKnown RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 ARFIP2P53365 341 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 EPHB1P54762 984 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 VCPP55072 806 aaKnown RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 TSNAXIP1Q2TAA8 658 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 B3GNT9Q6UX72 402 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 CRELD2Q6UXH1 353 aaPredicted RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 FAM83AQ86UY5 434 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 ARID3BQ8IVW6 561 aaPredicted RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 PPFIBP2Q8ND30 876 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 C7orf43Q8WVR3 580 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 MAGEB18Q96M61 343 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 B3GNT5Q9BYG0 378 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 PSMC3IPQ9P2W1 217 aaPredicted RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 A0A087WZ62 844 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 HCRTO43612 131 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 SERPINB3P29508 390 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 TTC7BQ86TV6 843 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 ATP11CQ8NB49 1132 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 NDRG1Q92597 394 aaKnown RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 FAM161BQ96MY7 647 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 FDXACB1Q9BRP7 624 aaPredicted RBP14.29□□□□□ -0.12
NDEL1-204ENST00000578172 IRAK4Q9NWZ3 460 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 CYB561D2O14569 222 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 PSTPIP1O43586 416 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 CREB3O43889 395 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 ZNF286BP0CG31 522 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 IVDP26440 423 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 RASSF2P50749 326 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 GTF2A2P52657 109 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 BCAR1P56945 870 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 MGAT5Q09328 741 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 C16orf46Q6P387 395 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 ABHD15Q6UXT9 468 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 RSPH3Q86UC2 560 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 TWNKQ96RR1 684 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 OSBPL1AQ9BXW6 950 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 TXLNGQ9NUQ3 528 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 ARHGAP28Q9P2N2 729 aa14.29□□□□□ -0.12
NDEL1-204ENST00000578172 SLX4Q8IY92 1834 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 C5orf60A6NFR6 353 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 H0YCG3 227 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 ROR1Q01973 937 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 XRCC4Q13426 336 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 NFIL3Q16649 462 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 ZNF75CPQ92670 426 aaPredicted RBP14.28□□□□□ -0.12
NDEL1-204ENST00000578172 PIWIL1Q96J94 861 aaKnown RBP14.28□□□□□ -0.12
NDEL1-204ENST00000578172 TSSK1BQ9BXA7 367 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 PORCNQ9H237 461 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 HOXC10Q9NYD6 342 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 TXNDC16Q9P2K2 825 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 ZNF214Q9UL59 606 aaPredicted RBP14.28□□□□□ -0.12
NDEL1-204ENST00000578172 UGT1A9O60656 530 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 HAUS5O94927 633 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 MUTP22033 750 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 CAV1Q03135 178 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 GRM1Q13255 1194 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 KCTD2Q14681 263 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 AGBL3Q8NEM8 1001 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 RXFP2Q8WXD0 754 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 SEPT1Q8WYJ6 367 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 KIF12Q96FN5 646 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 PRR11Q96HE9 360 aaPredicted RBP14.28□□□□□ -0.12
NDEL1-204ENST00000578172 UGT1A7Q9HAW7 530 aa14.28□□□□□ -0.12
NDEL1-204ENST00000578172 UGT1A10Q9HAW8 530 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms