RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 GSTA5Q7RTV2 222 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 ACOT1Q86TX2 421 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 ARFGAP2Q8N6H7 521 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 BBOF1Q8ND07 529 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 ANAPC5Q9UJX4 755 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 NME7Q9Y5B8 376 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 SMIM28A0A1B0GU29 152 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 TOMM70O94826 608 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 IVLP07476 585 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 HPDP32754 393 aaPredicted RBP19.07■□□□□ 0.64
SMPD3-211ENST00000568373 PKDCCQ504Y2 493 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 XKR4Q5GH76 650 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 KCNT1Q5JUK3 1230 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 TTC19Q6DKK2 380 aaPredicted RBP19.07■□□□□ 0.64
SMPD3-211ENST00000568373 UNC93AQ86WB7 457 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 TSPAN18Q96SJ8 248 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 RNF19AQ9NV58 838 aa19.07■□□□□ 0.64
SMPD3-211ENST00000568373 PIRO00625 290 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 DUSP11O75319 330 aaKnown RBP19.06■□□□□ 0.64
SMPD3-211ENST00000568373 RNF8O76064 485 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 KCNE1P15382 129 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 ZNF143P52747 638 aaPredicted RBP19.06■□□□□ 0.64
SMPD3-211ENST00000568373 SOWAHAQ2M3V2 549 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 FBXO47Q5MNV8 452 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 UBAP2Q5T6F2 1119 aaKnown RBP19.06■□□□□ 0.64
SMPD3-211ENST00000568373 FAM183BPQ6ZVS7 135 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 CCHCR1Q8TD31 782 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 ASNSD1Q9NWL6 643 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 KLK14Q9P0G3 267 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 NOVA2Q9UNW9 492 aaKnown RBP19.06■□□□□ 0.64
SMPD3-211ENST00000568373 ZNF148Q9UQR1 794 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 DRG1Q9Y295 367 aaKnown RBP19.06■□□□□ 0.64
SMPD3-211ENST00000568373 CEP350Q5VT06 3117 aa19.06■□□□□ 0.64
SMPD3-211ENST00000568373 XPOTO43592 962 aaKnown RBP19.05■□□□□ 0.64
SMPD3-211ENST00000568373 CTGFP29279 349 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 MIPP30301 263 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 CHKAP35790 457 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 TAZQ16635 292 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 OR6B2Q6IFH4 312 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 TTC30AQ86WT1 665 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 SMC1BQ8NDV3 1235 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 NKD2Q969F2 451 aaPredicted RBP19.05■□□□□ 0.64
SMPD3-211ENST00000568373 CNPY3Q9BT09 278 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 RNF39Q9H2S5 420 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 CDC42EP4Q9H3Q1 356 aaKnown RBP19.05■□□□□ 0.64
SMPD3-211ENST00000568373 FAM49BQ9NUQ9 324 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 MYADML2A6NDP7 307 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 C2CD4BA6NLJ0 364 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 PIK3R2O00459 728 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 CAND2O75155 1236 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 C6orf222P0C671 652 aaPredicted RBP19.05■□□□□ 0.64
SMPD3-211ENST00000568373 SETSIPP0DME0 302 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 GPD1P21695 349 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 KDELR1P24390 212 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 PCK1P35558 622 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 VCPP55072 806 aaKnown RBP19.05■□□□□ 0.64
SMPD3-211ENST00000568373 OASLQ15646 514 aaKnown RBP19.05■□□□□ 0.64
SMPD3-211ENST00000568373 TAF2Q6P1X5 1199 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 CROCCP2Q86T23 111 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 ALLCQ8N6M5 410 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 TRPV1Q8NER1 839 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 OR6B3Q8NGW1 331 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 TLCD1Q96CP7 247 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 ZNF560Q96MR9 790 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 TMEM109Q9BVC6 243 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 CALCOCO1Q9P1Z2 691 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 PCSK1NQ9UHG2 260 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 USP18Q9UMW8 372 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 IPPQ9Y573 584 aa19.05■□□□□ 0.64
SMPD3-211ENST00000568373 FAM155AB1AL88 458 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-211ENST00000568373 KPNA6O60684 536 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 MDH1P40925 334 aaKnown RBP19.04■□□□□ 0.64
SMPD3-211ENST00000568373 PNPLA4P41247 253 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 RGS7P49802 495 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 MAGOHP61326 146 aaKnown RBP19.04■□□□□ 0.64
SMPD3-211ENST00000568373 GUCY1A3Q02108 690 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 SREBF2Q12772 1141 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 IZUMO3Q5VZ72 239 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 PMF1Q6P1K2 205 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 CMASQ8NFW8 434 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-211ENST00000568373 HAUS1Q96CS2 278 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 PGM2Q96G03 612 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 PIWIL1Q96J94 861 aaKnown RBP19.04■□□□□ 0.64
SMPD3-211ENST00000568373 HESX1Q9UBX0 185 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 A8MXQ7 604 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 DCDC2CA8MYV0 355 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 KPNA7A9QM74 516 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 TULP2O00295 520 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 TRUB2O95900 331 aaKnown RBP19.04■□□□□ 0.64
SMPD3-211ENST00000568373 ITGAVP06756 1048 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 ARHGAP17Q68EM7 881 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 TRNP1Q6NT89 227 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 BBS12Q6ZW61 710 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 PRUNE1Q86TP1 453 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 SMG8Q8ND04 991 aaKnown RBP19.04■□□□□ 0.64
SMPD3-211ENST00000568373 SLC35B2Q8TB61 432 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 SLC35F5Q8WV83 523 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 RXFP2Q8WXD0 754 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 SLC4A5Q9BY07 1137 aa19.04■□□□□ 0.64
SMPD3-211ENST00000568373 GDAP2Q9NXN4 497 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms