RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 C11orf84Q9BUA3 381 aaPredicted RBP11.49□□□□□ -0.57
PABPN1-203ENST00000553960 CWH43Q9H720 699 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 CRTAC1Q9NQ79 661 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 CHST7Q9NS84 486 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 SEPT11Q9NVA2 429 aaKnown RBP11.49□□□□□ -0.57
PABPN1-203ENST00000553960 DDX43Q9NXZ2 648 aaKnown RBP11.49□□□□□ -0.57
PABPN1-203ENST00000553960 TFR2Q9UP52 801 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 BACE2Q9Y5Z0 518 aa11.49□□□□□ -0.57
PABPN1-203ENST00000553960 SF3B1O75533 1304 aaKnown RBP eCLIP11.49□□□□□ -0.57
PABPN1-203ENST00000553960 FAM92AA1XBS5 289 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 CASTOR2A6NHX0 329 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 H7C4K7 107 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 DDX3YO15523 660 aaKnown RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 BUB1O43683 1085 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 ENDOD1O94919 500 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 SLU7O95391 586 aaKnown RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 ITGB8P26012 769 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 PTPN9P43378 593 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 NOP2P46087 812 aaKnown RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 CCL23P55773 120 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 WDR5P61964 334 aaKnown RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 YWHAHQ04917 246 aaPredicted RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 RNASELQ05823 741 aaKnown RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 KIAA0319Q5VV43 1072 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 PM20D1Q6GTS8 502 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 SLC8B1Q6J4K2 584 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 PMF1Q6P1K2 205 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 PSRC1Q6PGN9 363 aaPredicted RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 OLFML1Q6UWY5 402 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 C4orf50Q6ZRC1 276 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 ANKS3Q6ZW76 656 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 RSRC2Q7L4I2 434 aaKnown RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 C12orf29Q8N999 325 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 PIK3R5Q8WYR1 880 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 CENPIQ92674 756 aaPredicted RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.571e-11■■■□□ 17
PABPN1-203ENST00000553960 CLP1Q92989 425 aaKnown RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 SMARCD1Q96GM5 515 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 FAM193BQ96PV7 902 aaPredicted RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
PABPN1-203ENST00000553960 C11orf70Q9BRQ4 267 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 TRIM62Q9BVG3 475 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 PLVAPQ9BX97 442 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 ZCWPW1Q9H0M4 648 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 PRDM16Q9HAZ2 1276 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 CNGB3Q9NQW8 809 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 MARCH5Q9NX47 278 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 RRN3Q9NYV6 651 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 FAN1Q9Y2M0 1017 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 USP3Q9Y6I4 520 aa11.48□□□□□ -0.57
PABPN1-203ENST00000553960 C2CD4BA6NLJ0 364 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 TMCO5BA8MYB1 307 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 HHLA1C9JL84 531 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 M0QYV0 167 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
PABPN1-203ENST00000553960 GABBR2O75899 941 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 URI1O94763 535 aaPredicted RBP11.47□□□□□ -0.57
PABPN1-203ENST00000553960 KRT3P12035 628 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 LAG3P18627 525 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 PPM1AP35813 382 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 SLC11A1P49279 550 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 ZNF143P52747 638 aaPredicted RBP11.47□□□□□ -0.57
PABPN1-203ENST00000553960 COPS2P61201 443 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 TSPY1Q01534 308 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 SLC6A3Q01959 620 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 PDE4CQ08493 712 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 TAZQ16635 292 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 GOLGA7BQ2TAP0 167 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 EFHC1Q5JVL4 640 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 DNAJC24Q6P3W2 148 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 CLEC20AQ6ZU45 233 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 RTL10Q7L3V2 364 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 PSTKQ8IV42 348 aaKnown RBP11.47□□□□□ -0.57
PABPN1-203ENST00000553960 KATNAL2Q8IYT4 538 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 DCP1BQ8IZD4 617 aaKnown RBP11.47□□□□□ -0.57
PABPN1-203ENST00000553960 TMEM130Q8N3G9 435 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 UBL4BQ8N7F7 174 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 RNF169Q8NCN4 708 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 FAM71BQ8TC56 605 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 HERVK_113Q902F9 699 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 PGAP3Q96FM1 320 aaPredicted RBP11.47□□□□□ -0.57
PABPN1-203ENST00000553960 PCED1BQ96HM7 432 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 C8orf48Q96LL4 319 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 TBCBQ99426 244 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 CNPY3Q9BT09 278 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 SELENOOQ9BVL4 669 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 B3GNT5Q9BYG0 378 aa11.47□□□□□ -0.57
PABPN1-203ENST00000553960 PUF60Q9UHX1 559 aaKnown RBP11.47□□□□□ -0.57
PABPN1-203ENST00000553960 PAPSS1O43252 624 aaPredicted RBP11.46□□□□□ -0.57
PABPN1-203ENST00000553960 TADA2AO75478 443 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 TADA3O75528 432 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 ITGB1P05556 798 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 FAM200BP0CF97 657 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 CSF2RAP15509 400 aa11.46□□□□□ -0.57
PABPN1-203ENST00000553960 IGFBP6P24592 240 aaPredicted RBP11.46□□□□□ -0.57
PABPN1-203ENST00000553960 ALDH7A1P49419 539 aaKnown RBP11.46□□□□□ -0.57
PABPN1-203ENST00000553960 GPR17Q13304 367 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms