RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SLC25A3Q00325 362 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 SPARCL1Q14515 664 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 HLXQ14774 488 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-210ENST00000553455 PTCHD3Q3KNS1 767 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 ARHGAP15Q53QZ3 475 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 RBM20Q5T481 1227 aaKnown RBP6.14□□□□□ -1.43
SYNE2-210ENST00000553455 VPS53Q5VIR6 699 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 CACHD1Q5VU97 1274 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 RAP1GAP2Q684P5 730 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 USP17L6PQ6QN14 398 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 MICALCLQ6ZW33 695 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 ATG16L2Q8NAA4 619 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 CCDC150Q8NCX0 1101 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 IL17DQ8TAD2 202 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 RNF31Q96EP0 1072 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 BOD1Q96IK1 185 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-210ENST00000553455 KLC2Q9H0B6 622 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 FAM83DQ9H4H8 585 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 TMEM74BQ9NUR3 256 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 AURKAIP1Q9NWT8 199 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-210ENST00000553455 DKK2Q9UBU2 259 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 CNOT11Q9UKZ1 510 aaKnown RBP6.14□□□□□ -1.43
SYNE2-210ENST00000553455 SSX2IPQ9Y2D8 614 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 CCDC189A1A4V9 331 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 MYADML2A6NDP7 307 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 AQP7P3A6NL99 342 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 PIAS2O75928 621 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 FGAP02671 866 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 GATA3P23771 443 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 MST1P26927 711 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 ATICP31939 592 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 SERPINF1P36955 418 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 VAV2P52735 878 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 FSTL1Q12841 308 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 PTK2BQ14289 1009 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 PREPLQ4J6C6 727 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-210ENST00000553455 PRR16Q569H4 304 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 TMTC4Q5T4D3 741 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 ARHGAP40Q5TG30 622 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 CCDC28AQ8IWP9 274 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 SPATA5Q8NB90 893 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 CXorf38Q8TB03 319 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 FAM71BQ8TC56 605 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 STYXQ8WUJ0 223 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 PPM1EQ8WY54 764 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 CCT6BQ92526 530 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 SNX19Q92543 992 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 C8orf49Q96NF6 230 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 OSBPL9Q96SU4 736 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 ALOXE3Q9BYJ1 711 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 PCDHAC1Q9H158 963 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 MYLK2Q9H1R3 596 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 MAGEH1Q9H213 219 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 UNKLQ9H9P5 680 aaKnown RBP6.13□□□□□ -1.43
SYNE2-210ENST00000553455 TMEM8AQ9HCN3 771 aa6.13□□□□□ -1.43
SYNE2-210ENST00000553455 ZMYND8Q9ULU4 1186 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-210ENST00000553455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.13□□□□□ -1.43
SYNE2-210ENST00000553455 A0A0B4J269 797 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 K7ESM1 405 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 PIP5K1BO14986 540 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 MUSKO15146 869 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 SRGAP2O75044 1071 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 RASAL1O95294 804 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 PECAM1P16284 738 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-210ENST00000553455 CD6P30203 668 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 SATB1Q01826 763 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 FPGSQ05932 587 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 RESTQ13127 1097 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 GRM1Q13255 1194 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 TUBB3Q13509 450 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 CDSNQ15517 529 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 MAPKAPK3Q16644 382 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 SLC5A9Q2M3M2 681 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 MANEALQ5VSG8 457 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 SP5Q6BEB4 398 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-210ENST00000553455 LIN54Q6MZP7 749 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 RGS7BPQ6MZT1 257 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-210ENST00000553455 CPEB3Q8NE35 698 aaKnown RBP6.12□□□□□ -1.43
SYNE2-210ENST00000553455 DNAJB14Q8TBM8 379 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 SMCR8Q8TEV9 937 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-210ENST00000553455 PPP2R3CQ969Q6 453 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 FUBP1Q96AE4 644 aaKnown RBP6.12□□□□□ -1.43
SYNE2-210ENST00000553455 ISCA1Q9BUE6 129 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 TMEM120AQ9BXJ8 343 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 TRIM5Q9C035 493 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 ZNF703Q9H7S9 590 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-210ENST00000553455 GALNT9Q9HCQ5 603 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 DACT1Q9NYF0 836 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 LRFN1Q9P244 771 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 HPSEQ9Y251 543 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 GPR52Q9Y2T5 361 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 DGKBQ9Y6T7 804 aa6.12□□□□□ -1.43
SYNE2-210ENST00000553455 F5H697 171 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 TRIM38O00635 465 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 CD3EAPO15446 510 aaKnown RBP6.11□□□□□ -1.43
SYNE2-210ENST00000553455 NDUFA10O95299 355 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 TNFRSF6BO95407 300 aa6.11□□□□□ -1.43
SYNE2-210ENST00000553455 ITGA5P08648 1049 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms