RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TTF1Q15361 905 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-214ENST00000550893 PKN2Q16513 984 aaKnown RBP5.78□□□□□ -1.48
SCAF11-214ENST00000550893 CCL14Q16627 93 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 SBK1Q52WX2 424 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 FRMD7Q6ZUT3 714 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 RNF180Q86T96 592 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 CXorf67Q86X51 503 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-214ENST00000550893 THNSL2Q86YJ6 484 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 FOXP4Q8IVH2 680 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-214ENST00000550893 ANKRD13CQ8N6S4 541 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 CDYL2Q8N8U2 506 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 PIK3C3Q8NEB9 887 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 TRPV1Q8NER1 839 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 GBF1Q92538 1859 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 SLC5A5Q92911 643 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 PARK7Q99497 189 aaKnown RBP5.78□□□□□ -1.48
SCAF11-214ENST00000550893 ANO3Q9BYT9 981 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 PRO3102Q9H379 93 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 FBXO28Q9NVF7 368 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 NCDNQ9UBB6 729 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 ADAMTS5Q9UNA0 930 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 GIT1Q9Y2X7 761 aa5.78□□□□□ -1.48
SCAF11-214ENST00000550893 BAZ2BQ9UIF8 2168 aaKnown RBP5.77□□□□□ -1.49
SCAF11-214ENST00000550893 ASTN1O14525 1302 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 MUC3AQ02505 3323 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 NPIPB8E9PQR5 432 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 RNF113AO15541 343 aaKnown RBP5.77□□□□□ -1.49
SCAF11-214ENST00000550893 BPIP17213 487 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 ACVRL1P37023 503 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 GDF5P43026 501 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 IRX6P78412 446 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-214ENST00000550893 DHCR24Q15392 516 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 ELAVL1Q15717 326 aaKnown RBP5.77□□□□□ -1.49
SCAF11-214ENST00000550893 ABCB5Q2M3G0 1257 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 ATP13A4Q4VNC1 1196 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 CATSPERGQ6ZRH7 1159 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 FASTKD5Q7L8L6 764 aaKnown RBP5.77□□□□□ -1.49
SCAF11-214ENST00000550893 TBC1D10CQ8IV04 446 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 CMTM4Q8IZR5 234 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 ANKRD35Q8N283 1001 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 DIS3LQ8TF46 1054 aaKnown RBP5.77□□□□□ -1.49
SCAF11-214ENST00000550893 USP7Q93009 1102 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 PLEKHG4BQ96PX9 1271 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 FDXACB1Q9BRP7 624 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-214ENST00000550893 CRNKL1Q9BZJ0 848 aaKnown RBP5.77□□□□□ -1.49
SCAF11-214ENST00000550893 CSRNP2Q9H175 543 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 IL17RBQ9NRM6 502 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 MCM9Q9NXL9 1143 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 ING3Q9NXR8 418 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 TMPRSS11EQ9UL52 423 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 TMX2Q9Y320 296 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 HS3ST3A1Q9Y663 406 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 TANC1Q9C0D5 1861 aa5.77□□□□□ -1.49
SCAF11-214ENST00000550893 PFASO15067 1338 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 ZMYM6O95789 1325 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 SIP14410 1827 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 A0A0C4DFX4 3053 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 NEMP1O14524 444 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 ADCY6O43306 1168 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 MTSS1O43312 755 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 KDM1AO60341 852 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 NMT2O60551 498 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 SEC24DO94855 1032 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-214ENST00000550893 CLEC2LP0C7M8 214 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 EEF2P13639 858 aaKnown RBP5.76□□□□□ -1.49
SCAF11-214ENST00000550893 ID4P47928 161 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 MANFP55145 182 aaKnown RBP5.76□□□□□ -1.49
SCAF11-214ENST00000550893 PTH1RQ03431 593 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 SLC35G1Q2M3R5 365 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 CERKLQ49MI3 558 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-214ENST00000550893 FKBP15Q5T1M5 1219 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 IGFL4Q6B9Z1 124 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 SDE2Q6IQ49 451 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 Q6ZRM9 215 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 CERS3Q8IU89 383 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 UNC5BQ8IZJ1 945 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 UBR7Q8N806 425 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 GAB3Q8WWW8 586 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 MIEF2Q96C03 454 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 NUP88Q99567 741 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-214ENST00000550893 PRDM12Q9H4Q4 367 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 RPAP3Q9H6T3 665 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-214ENST00000550893 VCPKMTQ9H867 229 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 ATP8A2Q9NTI2 1148 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 NUMBLQ9Y6R0 609 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 SLC4A4Q9Y6R1 1079 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 WDR81Q562E7 1941 aa5.76□□□□□ -1.49
SCAF11-214ENST00000550893 NEDD4P46934 1319 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 SCN10AQ9Y5Y9 1956 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 C19orf81C9J6K1 198 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 PRDM1O75626 825 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 STC2O76061 302 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 ALDH1A2O94788 518 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 LY86O95711 162 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 HLA-DOAP06340 250 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 CCL5P13501 91 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 HSD3B2P26439 372 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 SCNN1GP51170 649 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms