RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 PTPN21Q16825 1174 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 EXOC3L4Q17RC7 722 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 CCDC142Q17RM4 750 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 SLC5A9Q2M3M2 681 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 TCP11X2Q5H9J9 407 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 FKBP15Q5T1M5 1219 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 GPR158Q5T848 1215 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 RRAGAQ7L523 313 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 NPAS3Q8IXF0 933 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 YAF2Q8IY57 180 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 UBALD2Q8IYN6 164 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 C12orf29Q8N999 325 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 SPATA17Q96L03 361 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 C8orf48Q96LL4 319 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 CRACR2AQ9BSW2 395 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 C1QTNF1Q9BXJ1 281 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 ZNF518BQ9C0D4 1074 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 NDST4Q9H3R1 872 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 ZFP14Q9HCL3 533 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 UBE2TQ9NPD8 197 aaPredicted RBP13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 DMAP1Q9NPF5 467 aaPredicted RBP13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 KRT82Q9NSB4 513 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 SAMSN1Q9NSI8 373 aaKnown RBP13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 ZMYM5Q9UJ78 669 aa13.3□□□□□ -0.28
CYB561A3-213ENST00000539890 PI4K2BG5E9Z4 385 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 RTN3O95197 1032 aaPredicted RBP13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 KRT5P13647 590 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 RFX1P22670 979 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 AVPR1AP37288 418 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 USP8P40818 1118 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 EPHA5P54756 1037 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 ANO6Q4KMQ2 910 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 PRSS36Q5K4E3 855 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 TMEM270Q6UE05 265 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 ENOSF1Q7L5Y1 443 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 FAM35AQ86V20 835 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 NUP93Q8N1F7 819 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 ZSCAN18Q8TBC5 510 aaPredicted RBP13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 E2F7Q96AV8 911 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 PCMTD1Q96MG8 357 aaPredicted RBP13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 SLITRK1Q96PX8 696 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 MED15Q96RN5 788 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 ARID3AQ99856 593 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 TRPC7Q9HCX4 862 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 FANCLQ9NW38 375 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 TRPM5Q9NZQ8 1165 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 HESX1Q9UBX0 185 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 HMGXB4Q9UGU5 601 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 FBXL21Q9UKT6 434 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 KIAA1257Q9ULG3 409 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 NME7Q9Y5B8 376 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 NUMBLQ9Y6R0 609 aa13.29□□□□□ -0.28
CYB561A3-213ENST00000539890 SYCE3A1L190 88 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 GTPBP10A4D1E9 387 aaKnown RBP13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 NOL4O94818 638 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 DDX6P26196 483 aaKnown RBP eCLIP13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 CCR2P41597 374 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 PPP3CCP48454 512 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 PDE6CP51160 858 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 MAP3K7CLP57077 242 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 ZXDAP98168 799 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 GCNT1Q02742 428 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 SGO2Q562F6 1265 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 PARM1Q6UWI2 310 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 C11orf57Q6ZUT1 292 aaPredicted RBP13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 TMC8Q8IU68 726 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 IRF2BP1Q8IU81 584 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 FUKQ8N0W3 1084 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 SLC44A3Q8N4M1 653 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 STKLD1Q8NE28 680 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 ST13P5Q8NFI4 369 aaPredicted RBP13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 RSAD2Q8WXG1 361 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 EDAQ92838 391 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 SMARCD2Q92925 531 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 JAKMIP2Q96AA8 810 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 TRMT2BQ96GJ1 504 aaKnown RBP13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 TWNKQ96RR1 684 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 HNRNPABQ99729 332 aaKnown RBP13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 KXD1Q9BQD3 176 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 VPS16Q9H269 839 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 TASP1Q9H6P5 420 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 TAB2Q9NYJ8 693 aa13.28□□□□□ -0.28
CYB561A3-213ENST00000539890 STK25O00506 426 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 VDRP11473 427 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 HMGA1P17096 107 aaKnown RBP13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 SLC9A1P19634 815 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 YWHAQP27348 245 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 ZNF165P49910 485 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 RAD23BP54727 409 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 CYP4F8P98187 520 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 ARHGAP44Q17R89 818 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 FAM78AQ5JUQ0 283 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 GAREM2Q75VX8 874 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 MAB21L3Q8N8X9 362 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 SLC4A11Q8NBS3 891 aa13.27□□□□□ -0.29
CYB561A3-213ENST00000539890 TTC16Q8NEE8 873 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms