RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PRCCQ92733 491 aaPredicted RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 VCPIP1Q96JH7 1222 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 GORASP1Q9BQQ3 440 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 FAM49AQ9H0Q0 323 aaPredicted RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 SEMA4AQ9H3S1 761 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 TUT1Q9H6E5 874 aaKnown RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 LRRC19Q9H756 370 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 VTA1Q9NP79 307 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 SNX3O60493 162 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 KRT16P08779 473 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 ATF7P17544 494 aaPredicted RBP12.15□□□□□ -0.46
USP35-207ENST00000530546 OGDHQ02218 1023 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 CALCOCO2Q13137 446 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 DENND2CQ68D51 928 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 ASRGL1Q7L266 308 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 PPTC7Q8NI37 304 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 RAB3IPQ96QF0 476 aaPredicted RBP12.15□□□□□ -0.46
USP35-207ENST00000530546 OSBPL8Q9BZF1 889 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 SDCBP2Q9H190 292 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 PDZD7Q9H5P4 517 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 INTS9Q9NV88 658 aaKnown RBP12.15□□□□□ -0.46
USP35-207ENST00000530546 WDR35Q9P2L0 1181 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 HMGXB4Q9UGU5 601 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 RNF8O76064 485 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 CALB1P05937 261 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 SMPD1P17405 629 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 DRG2P55039 364 aaKnown RBP12.15□□□□□ -0.46
USP35-207ENST00000530546 CUL3Q13618 768 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 SLC29A2Q14542 456 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 AMHR2Q16671 573 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 PRAMEF19Q5SWL8 479 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 ANO7Q6IWH7 933 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 GPR142Q7Z601 462 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 FAM81AQ8TBF8 368 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 FBF1Q8TES7 1133 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 TWNKQ96RR1 684 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 C16orf70Q9BSU1 422 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 DCLK3Q9C098 648 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 RNF19AQ9NV58 838 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 IP6K2Q9UHH9 426 aa12.15□□□□□ -0.46
USP35-207ENST00000530546 USP15Q9Y4E8 981 aaPredicted RBP12.15□□□□□ -0.46
USP35-207ENST00000530546 TMEM191CA6NGB0 347 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 MAGEB2O15479 319 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 SUN1O94901 812 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 KRT1P04264 644 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 ATP6V1C1P21283 382 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 POLR2BP30876 1174 aaKnown RBP12.15□□□□□ -0.47
USP35-207ENST00000530546 GTF2A2P52657 109 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 DYNC1I2Q13409 638 aaKnown RBP12.15□□□□□ -0.47
USP35-207ENST00000530546 TXNRD3NBQ6F5E7 133 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 KIAA0319LQ8IZA0 1049 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 HAUS1Q96CS2 278 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 EPAS1Q99814 870 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 TXLNGYQ9BZA5 131 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 SYNCQ9H7C4 482 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 SETD4Q9NVD3 440 aa12.15□□□□□ -0.47
USP35-207ENST00000530546 PSTPIP1O43586 416 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 COQ9O75208 318 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 IL18RAPO95256 599 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 GNAZP19086 355 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 ZNF252P-AS1Q0IIN9 211 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 GRIK4Q16099 956 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 SLC10A6Q3KNW5 377 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 C12orf50Q8NA57 414 aaPredicted RBP12.14□□□□□ -0.47
USP35-207ENST00000530546 RUNDC3BQ96NL0 473 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 SELENOSQ9BQE4 189 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 STMN4Q9H169 189 aaPredicted RBP12.14□□□□□ -0.47
USP35-207ENST00000530546 ADAM7Q9H2U9 754 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 EPB41L4BQ9H329 900 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 PABPC3Q9H361 631 aaKnown RBP12.14□□□□□ -0.47
USP35-207ENST00000530546 PARP2Q9UGN5 583 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 RPS6KL1Q9Y6S9 549 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 PIK3R2O00459 728 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 ADCY8P40145 1251 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 SLCO1A2P46721 670 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 PTPN20Q4JDL3 420 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 MAIP1Q8WWC4 291 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 PWWP2AQ96N64 755 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 TRIM4Q9C037 500 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 CYTH4Q9UIA0 394 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 C2CD2Q9Y426 696 aa12.14□□□□□ -0.47
USP35-207ENST00000530546 LSM8O95777 96 aaKnown RBP12.13□□□□□ -0.47
USP35-207ENST00000530546 AGTP01019 485 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 MCF2P10911 925 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 NUGGCQ68CJ6 796 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 MFSD7Q6UXD7 560 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 GSTA5Q7RTV2 222 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 EMC1Q8N766 993 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
USP35-207ENST00000530546 ART4Q93070 314 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 MAML3Q96JK9 1138 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 TRAPPC9Q96Q05 1148 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 KATNBL1Q9H079 304 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 VCXQ9H320 206 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 DYNC1LI2O43237 492 aaPredicted RBP12.13□□□□□ -0.47
USP35-207ENST00000530546 STRNO43815 780 aa12.13□□□□□ -0.47
USP35-207ENST00000530546 CCNB1P14635 433 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms