RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 AKAP10O43572 662 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 PSMG1O95456 288 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 RRP1BQ14684 758 aaKnown RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 NDUFA5Q16718 116 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 OLFML2BQ68BL8 750 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 RNF135Q8IUD6 432 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 CYP4X1Q8N118 509 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 RIBC1Q8N443 379 aaPredicted RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 TBCKQ8TEA7 893 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 SERPINB12Q96P63 405 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 DEPDC7Q96QD5 511 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 FHDC1Q9C0D6 1143 aaPredicted RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 EML4Q9HC35 981 aaKnown RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 STARD13Q9Y3M8 1113 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 GOLGA8TH3BQL2 631 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 DAB2IPQ5VWQ8 1189 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 ARHGAP17Q68EM7 881 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 THNSL1Q8IYQ7 743 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 SMARCAD1Q9H4L7 1026 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 SLCO1B3Q9NPD5 702 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 WASF2Q9Y6W5 498 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 DNAJC3Q13217 504 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 PFKFB3Q16875 520 aaPredicted RBP11.97□□□□□ -0.49
U2AF1-209ENST00000475639 NUDT18Q6ZVK8 323 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 MARK2Q7KZI7 788 aaKnown RBP11.97□□□□□ -0.49
U2AF1-209ENST00000475639 CDC42EP4Q9H3Q1 356 aaKnown RBP11.97□□□□□ -0.49
U2AF1-209ENST00000475639 TUBGCP4Q9UGJ1 667 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 MAD2L2Q9UI95 211 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 NENFQ9UMX5 172 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 HUS1O60921 280 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 ZNF24P17028 368 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 AADACL2Q6P093 401 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 ZBTB8BQ8NAP8 495 aaPredicted RBP11.97□□□□□ -0.49
U2AF1-209ENST00000475639 WDR60Q8WVS4 1066 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 CCDC28BQ9BUN5 200 aa11.97□□□□□ -0.49
U2AF1-209ENST00000475639 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
U2AF1-209ENST00000475639 MYMKA6NI61 221 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 PRPF4O43172 522 aaKnown RBP eCLIP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 CSPG5O95196 566 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 PLA2G4BP0C869 781 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 VAV1P15498 845 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 BTDP43251 543 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 HPCAP84074 193 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 CSTF3Q12996 717 aaKnown RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 DCAF4L1Q3SXM0 396 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 AASDHQ4L235 1098 aaPredicted RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 C16orf62Q7Z3J2 963 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 CCDC103Q8IW40 242 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 SH3RF3Q8TEJ3 882 aaPredicted RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 PPP1R14AQ96A00 147 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 DNAJC1Q96KC8 554 aaKnown RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 ZBED2Q9BTP6 218 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 CNGB3Q9NQW8 809 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 UBAP1Q9NZ09 502 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 PHTF1Q9UMS5 762 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 STRNO43815 780 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 PABPC4LP0CB38 370 aaKnown RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 ST13P50502 369 aaKnown RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 TSPY1Q01534 308 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 TRIP10Q15642 601 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 NUP188Q5SRE5 1749 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 TTC27Q6P3X3 843 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 FAM180AQ6UWF9 173 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 TTC39CQ8N584 583 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 VPS37AQ8NEZ2 397 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 CLMNQ96JQ2 1002 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 DYRK4Q9NR20 520 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 TMEM2Q9UHN6 1383 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 SAC3D1A6NKF1 404 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 PSAPP07602 524 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 WDR4P57081 412 aaKnown RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 UBXN2AP68543 259 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 CTC1Q2NKJ3 1217 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 ZNF394Q53GI3 561 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 USP39Q53GS9 565 aaKnown RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 POTEAQ6S8J7 498 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 TAS2R42Q7RTR8 314 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 SRPK1Q96SB4 655 aaKnown RBP11.96□□□□□ -0.49
U2AF1-209ENST00000475639 BRD8Q9H0E9 1235 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 DNAJC12Q9UKB3 198 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 BCS1LQ9Y276 419 aa11.96□□□□□ -0.49
U2AF1-209ENST00000475639 SCN11AQ9UI33 1791 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 UBE4BO95155 1302 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 A0A0A6YYK5 440 aaPredicted RBP11.96□□□□□ -0.5
U2AF1-209ENST00000475639 RGS5O15539 181 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 GYG1P46976 350 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 PDIA2Q13087 525 aaKnown RBP11.96□□□□□ -0.5
U2AF1-209ENST00000475639 UGP2Q16851 508 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 CMTM5Q96DZ9 223 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 DCUN1D1Q96GG9 259 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 MPP4Q96JB8 637 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 KIF1AQ12756 1690 aa11.96□□□□□ -0.5
U2AF1-209ENST00000475639 CCDC195A0A1B0GUA6 201 aa11.95□□□□□ -0.5
U2AF1-209ENST00000475639 PLSCR1O15162 318 aa11.95□□□□□ -0.5
U2AF1-209ENST00000475639 RNASEH1O60930 286 aaKnown RBP11.95□□□□□ -0.5
U2AF1-209ENST00000475639 BMP3P12645 472 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms