RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 A0A088AWK7 358 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 C15orf38-AP3S2A0A0A6YYH1 394 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 SGK1O00141 431 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 LIASO43766 372 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 NPR1P16066 1061 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 DPEP1P16444 411 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 ATP2B4P23634 1241 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 DSG3P32926 999 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 NOVP48745 357 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 RPL7AP62424 266 aaKnown RBP8.32□□□□□ -1.08
TPM3-215ENST00000469717 FAAP100Q0VG06 881 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 TCEAL1Q15170 157 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 ARPINQ7Z6K5 226 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 DHDDSQ86SQ9 333 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 MCOLN2Q8IZK6 566 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 CPXCR1Q8N123 301 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.32□□□□□ -1.08
TPM3-215ENST00000469717 FBXO36Q8NEA4 188 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 HELQQ8TDG4 1101 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 GDPD5Q8WTR4 605 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 TEKT1Q969V4 418 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 TRIM56Q9BRZ2 755 aaKnown RBP8.32□□□□□ -1.08
TPM3-215ENST00000469717 UBAP1Q9NZ09 502 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 ZBTB21Q9ULJ3 1066 aa8.32□□□□□ -1.08
TPM3-215ENST00000469717 NHSQ6T4R5 1651 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 A8MXQ7 604 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 PDLIM1O00151 329 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 CIB2O75838 187 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 DESP17661 470 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 MSX2P35548 267 aaPredicted RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 ETV4P43268 484 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 ATXN3P54252 364 aaPredicted RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 AQP5P55064 265 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 BST1Q10588 318 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 TLR1Q15399 786 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 SMAD1Q15797 465 aaKnown RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 PPP6R3Q5H9R7 873 aaPredicted RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 EFHC2Q5JST6 749 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 RNASEH2BQ5TBB1 312 aaKnown RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 IYDQ6PHW0 289 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 DENND5BQ6ZUT9 1274 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 SYDE1Q6ZW31 735 aaPredicted RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 TMPRSS6Q8IU80 811 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 RELL1Q8IUW5 271 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 MORC4Q8TE76 937 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 PYROXD1Q8WU10 500 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 DCAKDQ8WVC6 231 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 PRPF31Q8WWY3 499 aaKnown RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 MBOAT7Q96N66 472 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 HSPBP1Q9NZL4 362 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 AFG3L2Q9Y4W6 797 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 ALOX15BO15296 676 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 HNRNPCL1O60812 293 aaKnown RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 DNAJC6O75061 913 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 GAP43P17677 238 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 ZNF200P98182 395 aaPredicted RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 HIF1AQ16665 826 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 CLEC16AQ2KHT3 1053 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 SH3D19Q5HYK7 790 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 SCARA3Q6AZY7 606 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 ZFP28Q8NHY6 868 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 ZNF398Q8TD17 642 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 FAM172AQ8WUF8 416 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 RILPQ96NA2 401 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 OLFM3Q96PB7 478 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 SLC13A1Q9BZW2 595 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 IQCGQ9H095 443 aaKnown RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 XPNPEP1Q9NQW7 623 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 MTO1Q9Y2Z2 717 aaKnown RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 ZNF711Q9Y462 761 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 AVILO75366 819 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 UQCRBP14927 111 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 NELFEP18615 380 aaKnown RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 GTF2H1P32780 548 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 MAP7Q14244 749 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 SPDYAQ5MJ70 313 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 SPOPLQ6IQ16 392 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 NET1Q7Z628 596 aaPredicted RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 NME8Q8N427 588 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 ERLEC1Q96DZ1 483 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 TSPYL2Q9H2G4 693 aaPredicted RBP8.31□□□□□ -1.08
TPM3-215ENST00000469717 S100A14Q9HCY8 104 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 HOMER2Q9NSB8 354 aa8.31□□□□□ -1.08
TPM3-215ENST00000469717 C10orf71Q711Q0 1435 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 FOXD2O60548 495 aaPredicted RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 UGT1A9O60656 530 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 MAGEC1O60732 1142 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TMCC1O94876 653 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TMEM63AO94886 807 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 MAN1A1P33908 653 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SERPINB6P35237 376 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 EMP3P54852 163 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 SP4Q02446 784 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 CENPCQ03188 943 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 TBL3Q12788 808 aaKnown RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 NFX1Q12986 1120 aaKnown RBP8.3□□□□□ -1.08
TPM3-215ENST00000469717 BMPR2Q13873 1038 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 CCNIQ14094 377 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 KRT72Q14CN4 511 aa8.3□□□□□ -1.08
TPM3-215ENST00000469717 MYLK3Q32MK0 819 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms