RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ZNF398Q8TD17 642 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 MCUR1Q96AQ8 359 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 NMUR2Q9GZQ4 415 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 ZNF395Q9H8N7 513 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 PDLIM7Q9NR12 457 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 AGTPBP1Q9UPW5 1226 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 C2CD2Q9Y426 696 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 SMAPO00193 183 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 LMNAP02545 664 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 PYGBP11216 843 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 NEFHP12036 1026 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 SFNP31947 248 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 PHBP35232 272 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 ETV4P43268 484 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 BASP1P80723 227 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 FAAP100Q0VG06 881 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 PTK7Q13308 1070 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 THOC5Q13769 683 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 PRKD1Q15139 912 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 RASA2Q15283 850 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 TAF5Q15542 800 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 ARHGEF16Q5VV41 709 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 CDHR3Q6ZTQ4 885 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 KIAA0319LQ8IZA0 1049 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 WDTC1Q8N5D0 677 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 XPO7Q9UIA9 1087 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 ASB3Q9Y575 518 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 TM9SF1O15321 606 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 AVILO75366 819 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 NPTXRO95502 500 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 PRKCEQ02156 737 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 LBRQ14739 615 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 CES4AQ5XG92 561 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 JOSD2Q8TAC2 188 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 SHKBP1Q8TBC3 707 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 CLPTM1LQ96KA5 538 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 TARS2Q9BW92 718 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 PPP1R12CQ9BZL4 782 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 VPS11Q9H270 941 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 KRT82Q9NSB4 513 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 FCHO1O14526 889 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 AHCYL1O43865 530 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 RAD17O75943 681 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 ESRRAP11474 423 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 ELK3P41970 407 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 NEK3P51956 506 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 SARNPP82979 210 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 SLC34A1Q06495 639 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 BIRC2Q13490 618 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 NCOA4Q13772 614 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 KBTBD12Q3ZCT8 623 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 HSF5Q4G112 596 aaPredicted RBP12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 PPP1R15BQ5SWA1 713 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 GPAT2Q6NUI2 795 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 IRGCQ6NXR0 463 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 SLC30A9Q6PML9 568 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 SCARA5Q6ZMJ2 495 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 FAM71DQ8N9W8 422 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 TFAP2BQ92481 460 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 SH3GL3Q99963 347 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 CYP26B1Q9NR63 512 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 PAPOLBQ9NRJ5 636 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 RPL26L1Q9UNX3 145 aaKnown RBP12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 RIPK3Q9Y572 518 aa12.29□□□□□ -0.44
PDZRN3-203ENST00000462146 SIP14410 1827 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 KBTBD13C9JR72 458 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 MT-ND3P03897 115 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 DHRS4L1P0CG22 281 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 RFC1P35251 1148 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 TNFSF9P41273 254 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 ZNF132P52740 706 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 HIRAP54198 1017 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 KLHL38Q2WGJ6 581 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 SLC27A3Q5K4L6 730 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 TMEM130Q8N3G9 435 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 EMC1Q8N766 993 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 OXNAD1Q96HP4 312 aaPredicted RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 DDX50Q9BQ39 737 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 CNTN6Q9UQ52 1028 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 LRCH1Q9Y2L9 728 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 CNTNAP2Q9UHC6 1331 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 CCDC195A0A1B0GUA6 201 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 TCRBV9S1A1TA0A576 114 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 LRRIQ4A6NIV6 560 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 E7ESA3 106 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 H3BRJ5 948 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 DGAT1O75907 488 aa12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 PAPOLAP51003 745 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 SLC25A11Q02978 314 aaKnown RBP12.28□□□□□ -0.44
PDZRN3-203ENST00000462146 LRRC38Q5VT99 294 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms